Query= MSMg01no396_k11.b1 MSMg01no396_k11.b1 CHROMAT_FILE:
MSMg01no396_k11.b1 PHD_FILE: MSMg01no396_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:50 2005
(233 letters)
>mm_chr3_147115034_147115666
Length = 633
Score = 416 bits (215), Expect = e-121
Identities = 227/231 (98%)
Strand = Plus / Plus
Query: 1 catctgaggcctatgcttaaacgacaaacatcttcccacaatgatgagctgctaactcca 60
|||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 201 catctgaggcctatgcttaaacgacaaacatcatcccataatgaggagctgctaactcca 260
Query: 61 ttaatgcaatgggggaggggttgttctctttcatttcctggctcatctcttgcttcacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatgcaatgggggaggggttgttctctttcatttcctggctcatctcttgcttcacgc 320
Query: 121 tttctgggtctctggcactgctttctaccataagtcagaaatgaattttttaaaataagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctgggtctctggcactgctttctaccataagtcagaaatgaattttttaaaataagc 380
Query: 181 acttgtactttgaaccataaaacaaaatctgaggcagaaatcagaggaaga 231
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 acttgtactttgaaccataaaacaaaatccgaggcagaaatcagaggaaga 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_k11.g1 MSMg01no396_k11.g1 CHROMAT_FILE:
MSMg01no396_k11.g1 PHD_FILE: MSMg01no396_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:50 2005
(357 letters)
>mm_chr3_147337583_147338340
Length = 758
Score = 609 bits (315), Expect = e-179
Identities = 347/358 (96%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 1 ttggcatagacaggattgtctggtgctgtttgttctcacactatcttttgcaatgggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttggcatagacaggattgtctggtgctgtttgttctcacactatcttttgcaatgggaga 384
Query: 61 attgngta-actttcagattggttgggattcttgaaattggacattttacatccccatgg 119
| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aacgtgaagactttcagattggttgggattcttgaaattggacattttacatccccatgg 324
Query: 120 gagatgctacatctccaacatgaaaactcatttggaaataatacagatatctgaaattta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gagatgctacatctccaacatgaaaactcatttggaaataatacagatatctgaaattta 264
Query: 180 aattgtatttattaacaaagtggtttgtgtttattttctttatagtgagatggtcttcat 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 263 aattgtatttattaacaaagtgttttgtgtttattttctttatagtgagatggtcttcat 204
Query: 240 ttgtgccaaaaagatgacttgggggttcaaagcatttgttattctttcagaagatgtggg 299
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 203 ttgggccaaaaagatgacttgggg-ttcaaagcatttgttattctttcagaagatgtggg 145
Query: 300 tttaattcaaaactcctatatggcggctaataacatttgcaactccagttccagaggg 357
||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 144 tttaattcaaacctcctatatggtggttaataacatttgcaactccagttccagaggg 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
