NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGACAATCC
GCGGAATTCCATGAATTTCATATTTTTAATAGCTGAGTAGTACCCTTGTG
TCAATGAATCACATTTCTGACCAGACAACTCAAAAGTGGGACAAAGAATA
TTCTGTCCCATTGTTCTTTGCCTCTACCCACAGCAGAGGTCACAAACTAT
TGTCCCTGAGACCTACATGTCTGTGCTTCCTCTCCATTCCACAACCTGAT
CTGAATTCCCCTTTTCTTCCTGTCTGTCCAGGAAATCCTGCCCTTTTCCA
GCGATTAGCTTCTGCCCTCTTTTTTTACCCCAATCAAGAGACAATTAGGG
AACCTCTGCCTACATGACTGCACAGAGCAGTTAAATGTGTGAAGTTATAA
AGTTCTTAATAATTTTAGTATTGATTAGTATTTGGTCTGGAGCTAAAACA
ACTTAAAACAATAATAATAAGATTATTACACAGACATACCATACCACACC
ACACTACATTACTATCAGAATGGCTGCATATCAATGAAGTCCAAGTTGAA
GGTTTTGCTTAGGTTCTCATACTTTCCCTATGCCCCATCTTCTTTTCACC
TAATCTCATATGTTCATATAGATCATCTGTGCCCACTAGACCTCGCTGTC
TCTTTCTATTCCACCCATAACTCGGAAAAAATGGGAATCTTTGACCTGGG
TCTAAAGTAAACAAGACATTTTGCTTTATGAAACAAGGATCAAAGAATN

NNNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTCAGCAAACATCTTTGNTTAGCTCTGGACCCCATT
TTAAAATATGGTTATTTATTTCTCTGGAGGCTAACTTCTTGAGTTCTTTG
TATATATTGAATATTAGCCATCTATCGTATGTAGGATTGGTAAGGATCTT
TTCCCAATCTCTTGGCTGCTGTTTTGTCCTATTGACAGTGTCCTTTGCCT
TATTTAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTCTTGATCTT
AGAGCATAAGCTATTGGTGGNATGNTTAGGAAATTTCCCCCTGTGCCCAT
GTGTTCCAGGCTTCCCCCCACTTTCTATTCTATTAGATTCAGTGCATCTG
GTTTTATGGTCCTTGATCCACTTGGACTTGAGCTTTCTACAAGGAGATAA
GAATGGATTGATTCGAATTCTTCTACATGATAACCACCAGTTGAGTCAGC
ACCATTTGTTAAAAATGCTGTCTTGCACTTGGAGCATAGATATTCATAAT
TGAGGGTTTGTCTTGGTAGACTTTTCCTTTGATGAGTATGAATGTTCTCT
TAGGGTCTGTATGAGATTTGAGAAGGAACTTCTACCCTTTCTAGACTCTG
TTTATGAGACTGGAACAATCTTTTTTATTACCTATAAAAAATTCTCTCCT
TTATATTTTCAAAGGTATCCCCAGGGCCCCTATACCTCCCCTGGCCGGG

Query= MSMg01no398_n24.b1 MSMg01no398_n24.b1 CHROMAT_FILE:
MSMg01no398_n24.b1 PHD_FILE: MSMg01no398_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:44 2005
         (552 letters)



>mm_chr3_14169609_14170560
          Length = 952

 Score = 1029 bits (532), Expect = 0.0
 Identities = 547/552 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagctgagtagtacccttgtgtcaatgaatcacatttctgaccagacaactcaaaagtgg 60
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 201 tagctgagtagtacccttgtgtcaatgaatcacatttctgaccacataactcaaaagtgg 260

                                                                       
Query: 61  gacaaagaatattctgtcccattgttctttgcctctacccacagcagaggtcacaaacta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaaagaatattctgtcccattgttctttgcctctacccacagcagaggtcacaaacta 320

                                                                       
Query: 121 ttgtccctgagacctacatgtctgtgcttcctctccattccacaacctgatctgaattcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtccctgagacctacatgtctgtgcttcctctccattccacaacctgatctgaattcc 380

                                                                       
Query: 181 ccttttcttcctgtctgtccaggaaatcctgcccttttccagcgattagcttctgccctc 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttttcttcctctctgtccaggaaatcctgcccttttccagcgattagcttctgccctc 440

                                                                       
Query: 241 tttttttaccccaatcaagagacaattagggaacctctgcctacatgactgcacagagca 300
           ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttattgaccccaatcaagagacaattagggaacctctgcctacatgactgcacagagca 500

                                                                       
Query: 301 gttaaatgtgtgaagttataaagttcttaataattttagtattgattagtatttggtctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttaaatgtgtgaagttataaagttcttaataattttagtattgattagtatttggtctg 560

                                                                       
Query: 361 gagctaaaacaacttaaaacaataataataagattattacacagacataccataccacac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagctaaaacaacttaaaacaataataataagattattacacagacataccataccacac 620

                                                                       
Query: 421 cacactacattactatcagaatggctgcatatcaatgaagtccaagttgaaggttttgct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacactacattactatcagaatggctgcatatcaatgaagtccaagttgaaggttttgct 680

                                                                       
Query: 481 taggttctcatactttccctatgccccatcttcttttcacctaatctcatatgttcatat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taggttctcatactttccctatgccccatcttcttttcacctaatctcatatgttcatat 740

                       
Query: 541 agatcatctgtg 552
           ||||||||||||
Sbjct: 741 agatcatctgtg 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)