Query= MSMg01no399_b06.b1 MSMg01no399_b06.b1 CHROMAT_FILE:
MSMg01no399_b06.b1 PHD_FILE: MSMg01no399_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:00 2005
(345 letters)
>mm_chr3_80598172_80598917
Length = 746
Score = 632 bits (327), Expect = 0.0
Identities = 339/343 (98%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 gattttacaacactaaaatcttaatttctgaagaagtctcaaaatattaaaattaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattttacaacactaaaatcttaatttctgaagaagtctcaaaatattaaaattaataaa 260
Query: 61 agcatgtatggcttttgacatagaaatgatttttttaggcataagatacagataaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcatgtatggcttttgacatagaaatgatttttttaggcataagatacagataaatcaa 320
Query: 121 agtagcataagaaattctttatttaaaaatgtctttctgaaataggcctggtatttcaca 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 agtagcataagaaattctttatttaaaaatgtctttctgaaatcggcctggtatttcaca 380
Query: 181 actctcctgat-ctattttgctgaagactgttcttaagtttatcatattaaatcttacaa 239
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctcctgattctattttgctgaagactgttcttaagtttatcatattaaatcttacaa 440
Query: 240 ctgtccctagccttaatccgcaagttagaagtaagcacttagactgttgatcaaattaat 299
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtccctagctttaatccgtaagttagaagtaagcacttagactgttgatcaaattaat 500
Query: 300 atcctaatgtaaaaaatgatatataataagttaatatacccaa 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcctaatgtaaaaaatgatatataataagttaatatacccaa 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 746
Length adjustment: 9
Effective length of query: 336
Effective length of database: 737
Effective search space: 247632
Effective search space used: 247632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_b06.g1 MSMg01no399_b06.g1 CHROMAT_FILE:
MSMg01no399_b06.g1 PHD_FILE: MSMg01no399_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:00 2005
(285 letters)
>mm_chr3_80779403_80780087
Length = 685
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 caaatttgacacactgtactgcagcagatgtaaaataatgtaagatgaaggactactcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caaatttgacacactgtactgcagcagatgtaaaataatgtaagatgaaggactactcat 268
Query: 61 ggaggttaaaaatcctccaggaatttgcagatgttcattactccaccaactctcctgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggaggttaaaaatcctccaggaatttgcagatgttcattactccaccaactctcctgaac 208
Query: 121 tctaggcatgaacatgattgacccagggagtggcactattaggaggcacagccttgttgc 180
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 207 tctaggcttgaacatgattgacccagggagtggcactattaggaggtacagccttgttgc 148
Query: 181 aggaggtgtggccttgttggaggaagtgtgttactatggcgatttgccttg-aaacctcc 239
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 147 aggaggtgtggccttgttggaggaagtgtgttactatggtgatttgccttggaaacctcc 88
Query: 240 tcctagctccctgaggacagtctgctcctggcttcctttggatgaa 285
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tcctagctccctgaggacagtctgctcctggcttcctttggatgaa 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
