Query= MSMg01no399_b09.b1 MSMg01no399_b09.b1 CHROMAT_FILE:
MSMg01no399_b09.b1 PHD_FILE: MSMg01no399_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:00 2005
(565 letters)
>mm_chr3_130785777_130786740
Length = 964
Score = 830 bits (429), Expect = 0.0
Identities = 453/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 7 gaattccagggttgcttcacagaggaatgcggtctctaaaaacaaacaacacacaaacaa 66
||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaattccagggctgtttcacataggaatgcggtctctaaaaacaaacaacacacaaacaa 401
Query: 67 acaaataataaaaatacttttgttattgatttgtccaagttctttctgtattaaaaatgc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acaaataataaaaatacttttgttattgatttgtccaagttctttctgtattaaaaatgc 341
Query: 127 tattttttcccttagttataattttaccagcctgctgtttttacctgttttattttgatt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tattttttcccttagttataattttaccagcctgctgtttttacctgttttattttgatt 281
Query: 187 tttgatttttttccatgcagaaactatttttcattgtccttggtttgttttttttttggt 246
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 280 tttgatttttttccatgcagaaactatttttcattgtccttggtttg-gttttttttggt 222
Query: 247 ttttggcttttggttttttggtttttcaagacagggtttctctgtatagctctggctgtt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ttttggcttttggttttttggtttttcaagacagggtttctctgtatagctctggctgtt 162
Query: 307 gtcctggaactcactcactcactctgtagaccaggctggcctcgaactcagaaatccacc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gtcctggaactcactcactcactctgtagaccaggctggcctcgaactcagaaatccacc 102
Query: 367 tgcccccccctcccaagtactgggattaagggcatgtgccaccagtgcctggccttttgt 426
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tgcctcttcctcccaagtactgggattaagggcatgtgccaccagtgcctggccttttgt 42
Query: 427 ttgtttgtttgcttgttttggttcattgttcttatgactta 467
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ttgtttgtttgcttgttttggttcattgttcttatgactta 1
Score = 134 bits (69), Expect = 2e-35
Identities = 126/151 (83%), Gaps = 13/151 (8%)
Strand = Plus / Plus
Query: 260 ttttttggtttttcaagacagggtttctctgtatagctctggctgttgtcctggaactca 319
|||||| |||||| ||||||||||||||||| |||| ||||| ||||||||||||||
Sbjct: 572 tttttt--tttttcgagacagggtttctctgtgtagccctggc---tgtcctggaactca 626
Query: 320 ctcactcactctgtagaccaggctggcctcgaactcagaaatccacctgcccccccctcc 379
|| | ||||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct: 627 ct-------t-tgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcc 678
Query: 380 caagtactgggattaagggcatgtgccacca 410
| ||| |||||||||| ||| || |||||||
Sbjct: 679 cgagtgctgggattaaaggcgtgcgccacca 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 565
Length of database: 964
Length adjustment: 10
Effective length of query: 555
Effective length of database: 954
Effective search space: 529470
Effective search space used: 529470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_b09.g1 MSMg01no399_b09.g1 CHROMAT_FILE:
MSMg01no399_b09.g1 PHD_FILE: MSMg01no399_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:00 2005
(320 letters)
>mm_chr3_130700622_130701341
Length = 720
Score = 580 bits (300), Expect = e-170
Identities = 315/320 (98%)
Strand = Plus / Plus
Query: 1 tgaagagtaagacagtaagagacagatattccctacctgtaagtccaccatacgatctag 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tgaagagtaagacagtaagagacagatatgccctacctgtaagtccaccatacgatctag 260
Query: 61 ccacagatggaaacagccagtttagaccatacctgtgcttccaaatccttgtttcttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacagatggaaacagccagtttagaccatacctgtgcttccaaatccttgtttcttccc 320
Query: 121 ttgttggaggcttccccttgcccactcatctccccaatcaagaagagtcacaatgctgtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ttgttggaggcttccccttgcccactcatctccccaatcaagaagagtcacaatgccgtg 380
Query: 181 atgcataccagggatgtgaatcgacccaaaggcaattgcatcccctgcgtgaggtgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcataccagggatgtgaatcgacccaaaggcaattgcatcccctgcgtgaggtgtttg 440
Query: 241 ctagtgaccctgagatgctatctggctatgatgaaggataatgcttaagaaagaaggtaa 300
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ctagggaccctgagatgctatctggctatgatgaaggataacgcttaagaaagaaggtaa 500
Query: 301 caccatcataagatcttcac 320
||||| ||||||||||||||
Sbjct: 501 caccaacataagatcttcac 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
