Query= MSMg01no399_n01.b1 MSMg01no399_n01.b1 CHROMAT_FILE:
MSMg01no399_n01.b1 PHD_FILE: MSMg01no399_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:55 2005
(432 letters)
>mm_chr7_25138276_25139108
Length = 833
Score = 547 bits (283), Expect = e-160
Identities = 298/303 (98%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 131 aactagcaatgtagtccagcttggccttgaagtagctatcctcctgcctcagcctcctga 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 aactagcaatgtagtccagcttggccttgaagtagctatcctcctgcctcagcctcctga 774
Query: 191 gtgctgggacaacaggctggtattaccactagccttgctagaagtgggtttttaaggtga 250
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gtgctgggacaacagcctggtattaccactagccttgctagaagtgggtttttaaggtga 714
Query: 251 gtggcatggtttgttgtgagagtttcacaaaaggctcatgtattgaaggcttggtgacca 310
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 713 gtggcatggtttgttgtgagagggtcacaaaaggctcatgtattgaaggcttggtgacca 654
Query: 311 ggggatggcactattgaaagctggttggacctcgttcaatgcactggatagatgggcc-t 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 653 ggggatggcactattgaaagctggttggacctcgttcaatgcactggatagatgggcctt 594
Query: 370 ccacgaggtggggccagcggcagtaaggagggacagagagcagggtggaaggttgtgact 429
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccaggaggtggggccagcggcagtaaggagggacagagagcagggtggaaggttgtgact 534
Query: 430 gga 432
|||
Sbjct: 533 gga 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 833
Length adjustment: 9
Effective length of query: 423
Effective length of database: 824
Effective search space: 348552
Effective search space used: 348552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_n01.g1 MSMg01no399_n01.g1 CHROMAT_FILE:
MSMg01no399_n01.g1 PHD_FILE: MSMg01no399_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:55 2005
(484 letters)
>mm_chr3_78290365_78291248
Length = 884
Score = 913 bits (472), Expect = 0.0
Identities = 481/484 (99%)
Strand = Plus / Minus
Query: 1 acccagagcacagggcttagtattcaccagagggtccacacaggagagaaaccctacacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 acccagagcacagggcttagtattcaccagagggtccacacaggagagaaaccctacacg 528
Query: 61 tgtcagcagtgtgggaagggcttcagtcaggcctcacacttccaaagacaccagagggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgtcagcagtgtgggaagggcttcagtcaggcctcacacttccaaagacaccagagggtc 468
Query: 121 cacaccagggagaagccctatatctgcggcatctgctgtaagggcttcagtcagagatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cacaccagggagaagccctatatctgcggcatctgctgtaagggcttcagtcagagatcg 408
Query: 181 catcttgtctaccaccagagggtccacagtgcaaggaatcgctagatgtgttctgccatc 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 catctcgtctaccaccagagggtccacagtgcaaggaatcgctagatgtgttctgccatc 348
Query: 241 agatggactccatgctcctcctgatggttaaaattgccccaaaacccagaggattcagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agatggactccatgctcctcctgatggttaaaattgccccaaaacccagaggattcagag 288
Query: 301 attaacaggggactgcatattattttatttaaccctcaactcattctcctactgggatcg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 attaacaggggactgcatattattttatttaaccctcaactcattctcctactgggatca 228
Query: 361 ttatgaaaagttccttatttaattataaaaggaagaattgtcagttgtcaggaacagaca 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 227 ttatgaaaagttccttatttaattataaaaggaagaattgtcaattgtcaggaacagaca 168
Query: 421 actgtcaggaacagcctcatacttgtgctaagatttgatagtatgggtagttaatcaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 actgtcaggaacagcctcatacttgtgctaagatttgatagtatgggtagttaatcaaga 108
Query: 481 ttga 484
||||
Sbjct: 107 ttga 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
