TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAA
TTCTACAGTTCTTCCCCTTTCTTGGGGATAAATTAAATAAAGAAAAGCAG
TCACTGTCTTTGATGAACAGCATATTTTTTGTTAGCCATCTGCCGTATAG
ATTTCTTGACAAGGCATAAGTGACTTTATCACTACCACTTTCACTTTTCG
AAGTCTCATCTCTACTTTTCATTTGGTCTTGTCAGACTCCAAAAGAAAGC
ATTCACATAGAAACTGTGTGGGTTAAAATGCTGGCATGTCTACAAATCAT
TGTTTGCTAATTGAATTCTGTGTTATTGAAATCTTTCAGTATCCTTTTAA
CAGGAAGATATCTAAAGATAATTAAAGGAAATGCTACATCCAGAGAAACT
TTCAGGCCTGGGTACATTATCAAAATAATTCATGGCACTGATGTCCTGTT
TACAAAGAAAAAGTTGTCATGGATCCTTGACAGTTTATAACTTTAATCAA
AAGTATTTTATTTCAGGTCTACAGAATGAGTTCCAGGACAGCCAGGCTAC
ACAGACAAAATTTGTCTCGGGGAAAGAAAAAAACCAAAGTATTTTATTTA
AAACTGTTGCTAAAAGGGGTTATCTCANACATCATGATCTTACAATGATG
GGAGTTCACATTAGATACATGATTATTTTAGCTAACAGTAGTTTACAGGT
TGTTGAACATGTAACACAGTGGGTGCCATTGTGTGTGGTGGCCAGAAACA
GAGATCAGATTACTGGGTAACCCTGTCT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTAAACCTGATAAACAACTTCAGTGAAGT
AGCTGGATATAAAATTAACCAAACAAGTCAATGGCCTTTCTGTACACAAA
GAATAAACAGGCTGAGAAAGAAATTAGGGCAACAACACCCTTCTCAATAG
TCACAAATAATATAAAATACCTTGGTGTGACTCTAACTAAGGTAGTAAAA
GATATCTATGATATGAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGT
GCTAAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATA
AGGTAAAAATGGCTGTCTTGCCACGAGCAATCTACAGATTCAATGCAATC
CTCATCAAAATTCCAAATCAATTTTTCAATGAGTTAGAAAGGGCAATCTG
CAAATTCATCTGGAATAACAAAAAACTAGGATAGCAAAAACTCTTCTCAA
GGATAAAAGAACCTCTGGTGGAATCACCGTGCCCAACCTAAGGCTGTACT
ACAGAGCAATTGTGATTAAAAAAACTGCATGGTACTGGTATAGCAACAGA
CAAGTAGACCAATGGAATAGAATTGAAAACCCAGAAATGAACCCACACAC
CTATGGTCACTTGATTTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAA
AAACAGCATTTTCCACAATGGTGTTGGCACAACTGGTGGNTATCATGTAG
AAAAACTGGATTAACCCATTCCATCTCCT

Query= MSMg01no400_d03.b1 MSMg01no400_d03.b1 CHROMAT_FILE:
MSMg01no400_d03.b1 PHD_FILE: MSMg01no400_d03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:25 2005
         (627 letters)



>mm_chr3_62447414_62448440
          Length = 1027

 Score = 1025 bits (530), Expect = 0.0
 Identities = 598/621 (96%), Gaps = 1/621 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattctacagttcttcccctttcttggggataaattaaataaagaaaagcagtcactgt 67
           ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 208 gaattctacagttcttaacctttcttggggataacttaaataaagaaaagcagtcactgt 267

                                                                       
Query: 68  ctttgatgaacagcatattttttgttagccatctgccgtatagatttcttgacaaggcat 127
           |||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| 
Sbjct: 268 ctttgatgaacagcatattttttgttagccattttccttatagatttcttgacaaggcaa 327

                                                                       
Query: 128 aagtgactttatcactaccactttcacttttcgaagtctcatctctacttttcatttggt 187
           ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 328 aagtgactttatcactaccactttcactttttgaagtctcatctctatttttcatttggt 387

                                                                       
Query: 188 cttgtcagactccaaaagaaagcattcacatagaaactgtgtgggttaaaatgctggcat 247
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 388 cttgtcagactccaaaagaaagaattcacatagaaactgtgtgggttaaaatgctggcat 447

                                                                       
Query: 248 gtctacaaatcattgtttgctaattgaattctgtgttattgaaatctttcagtatccttt 307
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 448 gtctacaaatcattgtttgctaattgaattttgtgttattggaatctttcagtatccttt 507

                                                                       
Query: 308 taacaggaagatatctaaagataattaaaggaaatgctacatccagagaaactttcaggc 367
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 508 taacaggaagatatctaaagataattaaaggaaatgttacatccagagaaactttcaggc 567

                                                                       
Query: 368 ctgggtacattatcaaaataattcatggcactgatgtcctgtttacaaagaaaaagttgt 427
           ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 568 ctgggtacattatcaaaataattcatggcaccgatgtcctgtctacaaagaaaaagttgt 627

                                                                       
Query: 428 catggatccttgacagtttataactttaatcaaaagtattttatttcaggtctacagaat 487
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 628 catggatccttgacagtttataacttcaatcaaaagtattttatttcaggtctacagaat 687

                                                                       
Query: 488 gagttccaggacagccaggctacacagacaaaatttgtctcggggaaagaaaaaaaccaa 547
           |||||||||||||||||||||||||||||||||| ||||| |||||||||||| | ||||
Sbjct: 688 gagttccaggacagccaggctacacagacaaaatgtgtctgggggaaagaaaagagccaa 747

                                                                       
Query: 548 agtattttatttaaaactgttgctaaaa-ggggttatctcanacatcatgatcttacaat 606
           |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 748 agtattttatttaaaactgttgctaaaaaggggttatctcaaacatcatgatcttacaat 807

                                
Query: 607 gatgggagttcacattagata 627
           |||||||||||| ||||||||
Sbjct: 808 gatgggagttcatattagata 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)