Query= MSMg01no401_c07.b1 MSMg01no401_c07.b1 CHROMAT_FILE:
MSMg01no401_c07.b1 PHD_FILE: MSMg01no401_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:42 2005
(502 letters)
>mm_chr3_119805464_119806365
Length = 902
Score = 957 bits (495), Expect = 0.0
Identities = 498/499 (99%)
Strand = Plus / Plus
Query: 1 ggggaggaaattataaagaagcagagacaagacaggattgtgataaggaatgtggtaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggggaggaaattataaagaagcagagacaagacaggattgtgataaggaatgtggtaaat 260
Query: 61 gatctaactaactaaccccaaatgtggcaatgatcacagtaaaacgtgaatggcatagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatctaactaactaaccccaaatgtggcaatgatcacagtaaaacgtgaatggcatagat 320
Query: 121 atgcaagtcaaaataagagtcttcttgattcagataggtaaccaaactgaggggtgtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcaagtcaaaataagagtcttcttgattcagataggtaaccaaactgaggggtgtggt 380
Query: 181 attttcaaaatgccttcattcattaggtatatgagaatgagacattaaaggctgagtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttcaaaatgccttcattcattaggtatatgagaatgagacattaaaggctgagtgct 440
Query: 241 tccagcaaataactgatccaaattatcagatatagctgtgagtcagagacatagctgtgg 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagcaaataactgaaccaaattatcagatatagctgtgagtcagagacatagctgtgg 500
Query: 301 agacagctattagacaaaattgtctttaaaaataaaccaattttgaagagtaaagaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacagctattagacaaaattgtctttaaaaataaaccaattttgaagagtaaagaaagt 560
Query: 361 caatatttaatgaaaaaattatagatctcatagagtatataaaaatctgaatgcatatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatatttaatgaaaaaattatagatctcatagagtatataaaaatctgaatgcatatgt 620
Query: 421 ctttacatatgtagttttattacatttttatatatgtggaaaaatgacaaaatcacaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctttacatatgtagttttattacatttttatatatgtggaaaaatgacaaaatcacaata 680
Query: 481 ggaaacttttttttttttt 499
|||||||||||||||||||
Sbjct: 681 ggaaacttttttttttttt 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_c07.g1 MSMg01no401_c07.g1 CHROMAT_FILE:
MSMg01no401_c07.g1 PHD_FILE: MSMg01no401_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:42 2005
(486 letters)
>mm_chr3_120006838_120007722
Length = 885
Score = 886 bits (458), Expect = 0.0
Identities = 479/486 (98%), Gaps = 1/486 (0%)
Strand = Plus / Minus
Query: 1 aaacgactttgctgaaacctttccaaaaagaaatggaagtttctggaacatcatgcaggt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaacgactttgctgtaacctttccaaaaagaaatggaagtttctggaacatcatgcaggt 443
Query: 61 ccccaaggacgttaactgccaacacaaacacaaaaaggcaatagggatgagatttgtcaa 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccccaaggacgttatctgccaacacaaacacaaaaaggcaatagggatgagatttgtcaa 383
Query: 121 cgcattgccaactatgtgtcacaaagccttccacatagaatatgctgaataaatgcctct 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cacattgccaactatgtgtcacaaagccttccacatagaatatgctgaataaatgcctct 323
Query: 181 caataaaagtgaaagaaggcttgataatttgttaagaggtttgcattgttgatatgagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caataaaagtgaaagaaggcttgataatttgttaagaggtttgcattgttgatatgagag 263
Query: 241 ctaaaaatataaacgagagttttatatgtatatggtttgaaaattctcagacaaatactt 300
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctaaaaaca-aaacgagagttttatatgtatatggtttgaaaattctcagacaaatactt 204
Query: 301 gggttaatcacttttctgccaccgtgacaaaacaccggagagaaacaacttgagcaaagg 360
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 203 gggttaatcacttttctgccaccgtgacaaaacactggagagaaacaacttgagcaaaga 144
Query: 361 aagatgtagtttggtcacagttttgtggtggagcctgaaggcttctcagctctcatactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 aagatgtagtttggtcacagttttgtggtggagcctgaaggcttctcagctctcatactc 84
Query: 421 ctacagaagttcagaaatgtcatgacaaaagagcatagccagataaagatgctcccttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ctacagaagttcagaaatgtcatgacaaaagagcatagccagataaagatgctcccttcc 24
Query: 481 tgagaa 486
||||||
Sbjct: 23 tgagaa 18
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 885
Length adjustment: 10
Effective length of query: 476
Effective length of database: 875
Effective search space: 416500
Effective search space used: 416500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
