CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTAGCATTCCCGCTATGTGATCGCCTGAGCTGTAACTTACATTCTC
TGTGTTCAAATTTCCTTGTCTAGAAAGCAAGGAGATATGAACAAAGACAG
AAGTTATAAGAATTACCCCTTGTGACTGCCGCACCCGGGGATCCATCCCA
TAATCAGCCTCCAAACGCAGACACCATTGCATATGCCAGCAAGATTTTGC
TGAATAGACCCTGATATAGCTGTCTCTTGTGGGGCTATGCCGGTGCCTGG
CAAACACAGAAGTGGATGTTCTTTAGTCAGCTATTGGATGGAACACAGGG
CCCCCACTGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGC
AACCCTATAGGTGGAACAACAATATGAACTAACTAGTACCCCCCAGAGCT
CGTGTCTCTAGCTGCATATGAATCAGAAGATGGCCTAGTTGGCCATCATT
GGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCTCAGTACAGGG
GAACACCAGAGCCAAGAAGTGAGAGTGGGGGGGTGGTAATGTCCGACTTT
TTGTTTCTCTCTTTTTCCCCTTCTTTCTTTCGTCTCTTTTCCCCTCCCCT
TTTTTTTCTTTTCTCTCTTCCTTCTACCCTCCTTTCCCTCTTCCTCTCCT
TTTTTCCCCTTTCCCTTTCTTTTTTTCTTTTTTTCCCTTTTTCCCTTTCC
CCCCCTTTTCCTTN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGAAAACCATGAAGTTCCAGAGCTCTT
TGGAGACACTGACATTCGGAAGGGGTATACATTATCTCAGCATCATTTCA
GGCATTGAGGAACATGTGTTGGGTTGTAAAAATTTATACATGATGAGACC
ACGCCCCATCATATTCCCTACCATATATATATATATATATATATATATAT
ATATATATATATATATATATATATACACACATATATATGTATATATATCA
CATACACCCTTTCTATGTATGAAAACTACATCATCTCAGCGATTCTCGAC
AGTCTCGAGAGACATTTGTCTTTCACAGTGTCATATCTACCCCCCACTGA
GAGGGATTGGGATCCAGAAAGATCTCTTGAAACATTATTGTGAGGGAAAG
CATGCCAAAGTTTCCCCATTTGTTTGCTTGTCGAGGCTAAGAAAACATTG
AAACCGGGACAGAGGGGGAGCAAACGATGTCTGTACTGACCTCAAACCCA
AAGATGATGATGCCTTTTTTTTTTCTTCAAAGAAAGACTCCTTTGAATGT
GTCTCTATGGTCTGGAGTCAGAGATGACGGCAGTGGCGGCATGTGTTACC
CCAAAGTACTCATAGGCCCTCATCTCTCCGTCTAGACTGTCTAAGTGACT
AGAGAAAATGCCCTGTGGNAATCAGGCACACTCATGGAGATGCCCAGGTT
CCATATGA

Query= MSMg01no401_n17.g1 MSMg01no401_n17.g1 CHROMAT_FILE:
MSMg01no401_n17.g1 PHD_FILE: MSMg01no401_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:35 2005
         (533 letters)



>mm_chr3_65372392_65373324
          Length = 933

 Score =  903 bits (467), Expect = 0.0
 Identities = 504/533 (94%), Gaps = 26/533 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagttccagagctctttggagacactgacattcggaaggggtatacattatctcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaagttccagagctctttggagacactgacattcggaaggggtatacattatctcagc 260

                                                                       
Query: 61  atcatttcaggcattgaggaacatgtgttgggttgtaaaaatttatacatgatgagacca 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 atcatttcaggcattgaggaacatgtgttgggttgtaaaaatttatacatgatgagacta 320

                                                                       
Query: 121 cgccccatcatattccctaccatatatatatatatatatatatatatatatatatatata 180
           |||||||||||||||||||||| ||||||||||||||||||||||||||           
Sbjct: 321 cgccccatcatattccctaccacatatatatatatatatatatatatat----------- 369

                                                                       
Query: 181 tatatatatatatacacacatatatatgtatatatatcacatacaccctttctatgtatg 240
                          |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ---------------acacatatatatgtatatatatcacatacaccctttctatgtatg 414

                                                                       
Query: 241 aaaactacatcatctcagcgattctcgacagtctcgagagacatttgtctttcacagtgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaaactacatcatctcagcgattctcgacagtctcgagagacatttgtctttcacagtgt 474

                                                                       
Query: 301 catatctaccccccactgagagggattgggatccagaaagatctcttgaaacattattgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 catatctaccccccactgagagggattgggatccagaaagatctcttgaaacattattgt 534

                                                                       
Query: 361 gagggaaagcatgccaaagtttccccatttgtttgcttgtcgaggctaagaaaacattga 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 535 gagggaaagcatgccaaagtttccccatttgtttgcttgtcaaggctaagaaaacattga 594

                                                                       
Query: 421 aaccgggacagagggggagcaaacgatgtctgtactgacctcaaacccaaagatgatgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aaccgggacagagggggagcaaacgatgtctgtactgacctcaaacccaaagatgatgat 654

                                                                
Query: 481 gccttttttttttcttcaaagaaagactcctttgaatgtgtctctatggtctg 533
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gccttttttttttcttcaaagaaagactcctttgaatgtgtctctatggtctg 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)