Query= MSMg01no402_m14.b1 MSMg01no402_m14.b1 CHROMAT_FILE:
MSMg01no402_m14.b1 PHD_FILE: MSMg01no402_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:48 2005
(244 letters)
>mm_chr3_119555946_119556597
Length = 652
Score = 427 bits (221), Expect = e-124
Identities = 241/253 (95%), Gaps = 10/253 (3%)
Strand = Plus / Plus
Query: 1 gagtggatgctggtttccacacctacccaagaaactaattgcagtagatacatgctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagtggatgctggtttccacacctacccaagaaactaattgcagtagatacatgctgaac 260
Query: 61 aagggaaaagcctgtttctccaacacagtgctgctggatctaccaaccacattctagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggaaaagcctgtttctccaacacagtgctgctggatctaccaaccacattctagatg 320
Query: 121 accaacacagagcaaaccccatccccccagtttttttgtttttgttttttgtttt----- 175
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 accaacacagagcaaaccccatccccccagtttttttgtttttgttttt-gttttttttt 379
Query: 176 ----attgagtttttcagggtttctttcttttttgagagagaacgaacatgaagttaagt 231
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 380 gtttattgagtttttcagggtttctttcttttttgagaaagaacaaacatgaagttaagt 439
Query: 232 ggatctggaggtg 244
|||||||||||||
Sbjct: 440 ggatctggaggtg 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 652
Length adjustment: 9
Effective length of query: 235
Effective length of database: 643
Effective search space: 151105
Effective search space used: 151105
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_m14.g1 MSMg01no402_m14.g1 CHROMAT_FILE:
MSMg01no402_m14.g1 PHD_FILE: MSMg01no402_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:48 2005
(369 letters)
>mm_chr3_119721795_119722563
Length = 769
Score = 706 bits (365), Expect = 0.0
Identities = 368/369 (99%)
Strand = Plus / Minus
Query: 1 cgtcaaaggaggttcggagaggcattctaatttcagagttagccacaattgtttaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cgtcaaaggaggttcggagaggcattctaatttcagagttagccacaattgtttaagttc 510
Query: 61 ctgttttagattaatggcttttgggtttctcatacgacatattgcatattggtgtcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ctgttttagattaatggcttttgggtttctcatacgacatattgcatattggtgtcagct 450
Query: 121 gcttgcagagaagtaatcctaacgcaattttaactccccaggatggccatttcctgcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gcttgcagagaagtaatcctaacgcaattttaactccccaggatggccatttcctgcgtg 390
Query: 181 gagagctgtggtgcggagcatgttcctctatgtagaaagatcgctggcacttactgggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gagagctgtggtgcggagcatgttcctctatgtagaaagatcgctggcacttactgggaa 330
Query: 241 ttgctgggcgtaagccaatgacctgttttcagttttctatgtggctggcttgtgggcact 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttgcagggcgtaagccaatgacctgttttcagttttctatgtggctggcttgtgggcact 270
Query: 301 gtgattctttgcttcttctctctggagtttgctacacttaagtttccagattcctcttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtgattctttgcttcttctctctggagtttgctacacttaagtttccagattcctcttgt 210
Query: 361 cctttcagc 369
|||||||||
Sbjct: 209 cctttcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
