Query= MSMg01no405_b24.b1 MSMg01no405_b24.b1 CHROMAT_FILE:
MSMg01no405_b24.b1 PHD_FILE: MSMg01no405_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:01 2005
(447 letters)
>mm_chr3_126237612_126238460
Length = 849
Score = 746 bits (386), Expect = 0.0
Identities = 429/444 (96%), Gaps = 4/444 (0%)
Strand = Plus / Minus
Query: 7 gaattctgggcattattgagactagagaggctactgtagtgaaagacgctgttattattg 66
|||||||||||| | |||||||||| ||||||||||||||||||| |||||| ||||||
Sbjct: 649 gaattctgggcaggaatgagactagaaaggctactgtagtgaaagaagctgttgttattg 590
Query: 67 gggacaagatgtaatgttgtggttggaaatttgaaaggagacagcagaccagttctgaat 126
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gggacaagacgtaatgttgtggttggaaatttgaaaggagacagcagaccagttctgaag 530
Query: 127 tctgtatcttggagagccagccaaccttaccaggatagtcttagctgaatcttagactta 186
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 529 tctgtatcttggagagccagccaaccttaccaggatagtcttagctgaatcctagactta 470
Query: 187 actcacaagcctatactcacagcagccatctttgtgcata-cacacacgtt--cagtttt 243
|||||||||||||||||| ||||||||||||||||||||| | || ||||| |||||||
Sbjct: 469 actcacaagcctatactcccagcagccatctttgtgcatatc-catacgttcacagtttt 411
Query: 244 catagaacaagaatgaactgaaactcagctatgtgcactgtgcagtgaattacaaaacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 catagaacaagaatgaactgaaactcagctatgtgcactgtgcagtgaattacaaaacac 351
Query: 304 acgaagctttttctctcatggaatttcacttgccttttgtacttggatgcctgaatactt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acgaagctttttctctcatggaatttcacttgccttttgtacttggatgcctgaatactt 291
Query: 364 gcttagacatttgacccttcttattggtaaatataagcatgtatatgttgattggagtta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcttagacatttgacccttcttattggtaaatataagcatgtatatgttgattggagtta 231
Query: 424 cctgatatttttttcccctggggt 447
||||||||||||||||||||||||
Sbjct: 230 cctgatatttttttcccctggggt 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 849
Length adjustment: 10
Effective length of query: 437
Effective length of database: 839
Effective search space: 366643
Effective search space used: 366643
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_b24.g1 MSMg01no405_b24.g1 CHROMAT_FILE:
MSMg01no405_b24.g1 PHD_FILE: MSMg01no405_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:01 2005
(408 letters)
>mm_chr3_126055870_126056677
Length = 808
Score = 735 bits (380), Expect = 0.0
Identities = 401/408 (98%)
Strand = Plus / Plus
Query: 1 tcaggtgacccattttcaaggaattttctgaagtgagagctatggagaaaacgggagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaggtgacccattttcaaggaattttctgaagtgagagctatggagaaaacgggagaaa 260
Query: 61 tatagacatttacagaaatgctacaaaacactttcatgagtattattcctacccaatcca 120
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tatagacatttacaggaatgctacaaaacactttcatgtgtattattcctacccaatcca 320
Query: 121 cagaaaataacactagcagtagatagagaccacaccctgaacacctgtaacagactaaaa 180
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 cagaaaataacagtagcagtagatagagaccacaccctgcacacctgtaacagactaaaa 380
Query: 181 cattgaatacatgtagtgtctcgatggacagtaggaaaaaaagtcaaactctgtcttaat 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattgaatacatgtagtgtcttgatggacagtaggaaaaaaagtcaaactctgtcttaat 440
Query: 241 cttttccttgaagtatgtgaaatatttgaaggttattttaaaaagagactatataactca 300
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 cttttccttgaagtatgttaaatatttgaaggttatttttaaaagagactatataactca 500
Query: 301 cagtgaagattatatataattctaccatgagatagttcagtagtctttcagagacacacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtgaagattatatataattctaccatgagatagttcagtagtctttcagagacacacg 560
Query: 361 ctcttccagctggcttctgtttgaacattttctgacatatagttggtg 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcttccagctggcttctgtttgaacattttctgacatatagttggtg 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
