ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTATTATCAGACATCTTCACGTCTGGCAAGTTTCCCACTCCTATTTG
TCTACACTCACTTAAAGGTTTGACTGAATTCTCCTGGATTTCTCTATCTT
TTAATGTTTATTCTTTTAAATTCTAGGACTTTTAAAATAATTTTTATTGC
TAAATAATTCCCATAGCATACAATTTGTCCATTTCAATTCAGCAGTTATG
AGTCCAAGCATTCATTTTTACATATATTTTGCAATTTCGTACACATAGAC
AATGTGTGATCATATTCATTGCCCCATGAACTTTATTATTTCTCACCCTC
ATTTGCCCTGTTTTGCTATCCCAACTAGTCCCTGCCTACTTTCATCATGT
CCTTTTTAGTCTTTTAAGTTCTTCATTGGCATTGTATTCATTAAATTTCC
TTGAGATTTGCTGTTGGATATATTTGTCCCTTTTAAGAGCACCTTACTGC
CATGTTTTATGATAGTCCTGTGCACCTACAATGAGATTGGATGTCTGAGA
AATCATTTATATCTAACACTTTTATAAGGCAGCCATATCAACAAGCTGAC
TTCTTATAATGGGAAGGTATAAGATTGTAATACAGTGAAGTTGATTACTG
CTAGCTAGACACCATGTGTCATCTCCATACAGGAGATATCTGTCTCTTTA
ATGACCCTATGTAGAGTGGGTAGCATGAAAGAATCAGAGAACTACTGGCT
GG

ATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTCAGCTGAAGAGAAGAATAAACAC
ATTTAAGGGGCCAAAAGAGATAAAGAACATCAGGTCAGTTAACTAAAGAG
GTCTAAGGAAACACCCCCAATCAACAAAATGTCAGGAATCAAGACATAAC
TTTCAATAATAACTCAGAATATGAAAAGTCTCAATTTCATAATAAAAGTA
CACAGTCTAGCAGAGTAGATAGAAAATAGGATCCATCTTCTTTTTGATTT
CAGGAAACATGTCTCAGTATCAAAAGTGGACCTCACCTTAAGGAGCAAGA
ATGAAAAACAGTATTCCAAGCAAATGGAACTAGGAAACAAGTGGGTGTAG
CTCATGTTACATCTGTCAAAATGACTTATAGCCAATACTAGTCAGAAGAC
ATAGGCAAGGGCACTACTTATTTATTTAAGAAAAAGTCTACTAATAGGAT
ATTGCAATTCTCAACACAGAGTCTCCAAACACAGGAGCACCCAGTTTCGT
GAACACATGCTATTAGATGTAAAACAACAGATTAACCCCCACAGTGATGG
TGACTCCAATAATCTACTCTCATCAATAGGAAAATTGTCCAAATAAAAAG
AGGACTGGGAGTCAATGACCTCAGAAATCCAATGGACCTAACAGAATTTT
ACTAACATTCCCTTCAACCAATAAGAAAAGGCTAATGCTCTCTTANCCCC
TGGAAATCTCTTCAAA

Query= MSMg01no407_a14.b1 MSMg01no407_a14.b1 CHROMAT_FILE:
MSMg01no407_a14.b1 PHD_FILE: MSMg01no407_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:34 2005
         (587 letters)



>mm_chr3_137052040_137053026
          Length = 987

 Score = 1104 bits (571), Expect = 0.0
 Identities = 583/587 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcacgtctggcaagtttcccactcctatttgtctacactcacttaaaggtttgactgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacgtctggcaagtttcccactcctatttgtctacactcacttaaaggtttgactgaat 260

                                                                       
Query: 61  tctcctggatttctctatcttttaatgtttattcttttaaattctaggacttttaaaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcctggatttctctatcttttaatgtttattcttttaaattctaggacttttaaaata 320

                                                                       
Query: 121 atttttattgctaaataattcccatagcatacaatttgtccatttcaattcagcagttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttttattgctaaataattcccatagcatacaatttgtccatttcaattcagcagttat 380

                                                                       
Query: 181 gagtccaagcattcatttttacatatattttgcaatttcgtacacatagacaatgtgtga 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gagtccaagcattcatttttacatatattttgcaattccgtacacatagacaatgtgtga 440

                                                                       
Query: 241 tcatattcattgccccatgaactttattatttctcaccctcatttgccctgttttgctat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 441 tcatattcattgccccatgaactttattatttctcaccctcatttgccctgttttgctac 500

                                                                       
Query: 301 cccaactagtccctgcctactttcatcatgtcctttttagtcttttaagttcttcattgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccaactagtccctgcctactttcatcatgtcctttttagtcttttaagttcttcattgg 560

                                                                       
Query: 361 cattgtattcattaaatttccttgagatttgctgttggatatatttgtcccttttaagag 420
           |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 561 cattgtattcattaaatttccttgagatatgctggtggatatatttgtcccttttaagag 620

                                                                       
Query: 421 caccttactgccatgttttatgatagtcctgtgcacctacaatgagattggatgtctgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caccttactgccatgttttatgatagtcctgtgcacctacaatgagattggatgtctgag 680

                                                                       
Query: 481 aaatcatttatatctaacacttttataaggcagccatatcaacaagctgacttcttataa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatcatttatatctaacacttttataaggcagccatatcaacaagctgacttcttataa 740

                                                          
Query: 541 tgggaaggtataagattgtaatacagtgaagttgattactgctagct 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgggaaggtataagattgtaatacagtgaagttgattactgctagct 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)