CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGTTTGCCTTGCCCCTCCCCACGAAAGGAAGCCAGCTACCGTTGT
AGAAGTCAATACTCCTGCGGAGAAACTACCCAGGCTTAGGAGACCTCAGG
AAAAGGGGACCTCTGACAGTACTCAAGTCTAGGAGGGACAGAAGACACAG
GACAGTGTGGGCAGGTGACAGGGGGCAAGGCCTCAGAGGAACTGTTTTTT
TCTCATACCTGATTGAAGTGGGAACTTCTGGTTAGGGAAGTGCTTTGTGC
AGAATACCATGAAATCCACAGAGAAGATAGAGTTAAGTTCACCATATAAG
CTGACTTAATACAAAGTCTCTCTTAGTAACCCAAGTGGTATGGAACTGCT
GGGTGGCAGGTACCATATGCATGGCTGCTGCCCAGGACAGCAAGGGACAC
ACCAGATTAGACAATTGGAGTTGGCTCTGACTGGTCCAGACCGGTCTGTA
TGGCGCTCCCAGGGAGAAGAAAGAACATTGGTTAGTTGATTAGTGTGATG
AGAAAGGAAAGAAAGATTTGGCAGAAACAGTTTAAGGATCCACACTTAAG
CTTGTCTTAAGCTTGCTACTTTTCCAAAAGCTTTGGACATTTTTCTCTGC
AGAAGAGAGAATTCAGGACTTTACTGTGAATTATTTACCTACTAATGTTG
CGATTTCTAAGGGGATATGGGTGGAACTCCTTTTTCCCTAAGCCTTTCCG
TT

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTCCCAAGTGCCCATATGGCAGCT
CACAGCCATCTAAAAGCAGTGACTCTCAACCTGTGGGTCTCAACCCCTTT
GGGGGATCAAACAACTTTTATATATGAGTCACGTCTAGATACCCTGCATA
TCAGATAGTTACATTACGAGTCATAACATTAGCAAAATTACACTTATGAA
GAAGCAATGAAAAAAATCTTATGGTTGTAGGTCACCACAACACTGTATTA
AAACTTCCCAGCATTAGGAAGGTCCAGAAAGACTACATACAGTTCCAGGG
GATCCAATACCTTCTTTTGACCTCCACTGAATCACATGTACATGGTGCAC
AGATATATGGCCAGATGTAATACTCAAGCACATAACAAATAATAAACAAC
TAAATATGTTAAAAGAACAAAGTATAATGACAAATGCATGAAAATGACAT
AATGAACCCAATTACTTCATGTGCATGAAACGATACATATAATTAAATAT
ATAACATATAAATAATAATAAATGCNCCTATATGTGGGAACAGGACCTGG
AAGGGGGTAAGAGGTGGCAGAACCCCTTGACAAATCCTGGGAGGCAGACT
CCGAAAACACCATTCGGTGGAGATTTGAAGTTATTGTTAGGACCTAAGCT
TATTTGGGGTGCTGAGAAAACCCCAGCCCTTATTTCCTGGGCCATTTGAC
CTTGCCCCN

Query= MSMg01no407_d18.b1 MSMg01no407_d18.b1 CHROMAT_FILE:
MSMg01no407_d18.b1 PHD_FILE: MSMg01no407_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:49 2005
         (534 letters)



>mm_chr3_83655146_83656079
          Length = 934

 Score = 1009 bits (522), Expect = 0.0
 Identities = 528/530 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgtttgccttgcccctccccacgaaaggaagccagctaccgttgtagaagtca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gaattcctgtttgccttgcccctccccacgaaaggaagccagctaccgttgtagaagtca 675

                                                                       
Query: 65  atactcctgcggagaaactacccaggcttaggagacctcaggaaaaggggacctctgaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atactcctgcggagaaactacccaggcttaggagacctcaggaaaaggggacctctgaca 615

                                                                       
Query: 125 gtactcaagtctaggagggacagaagacacaggacagtgtgggcaggtgacagggggcaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtactcaagtctaggagggacagaagacacaggacagtgtgggcaggtgacagggggcaa 555

                                                                       
Query: 185 ggcctcagaggaactgtttttttctcatacctgattgaagtgggaacttctggttaggga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggcctcagaggaactgtttttttctcatacctgattgaagtgggaacttctggttaggga 495

                                                                       
Query: 245 agtgctttgtgcagaataccatgaaatccacagagaagatagagttaagttcaccatata 304
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 494 agtgctttgtgcagaataccatgaaatccacagagaagatagagttaagctcaccatata 435

                                                                       
Query: 305 agctgacttaatacaaagtctctcttagtaacccaagtggtatggaactgctgggtggca 364
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agctgacttaatacaaagtccctcttagtaacccaagtggtatggaactgctgggtggca 375

                                                                       
Query: 365 ggtaccatatgcatggctgctgcccaggacagcaagggacacaccagattagacaattgg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggtaccatatgcatggctgctgcccaggacagcaagggacacaccagattagacaattgg 315

                                                                       
Query: 425 agttggctctgactggtccagaccggtctgtatggcgctcccagggagaagaaagaacat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agttggctctgactggtccagaccggtctgtatggcgctcccagggagaagaaagaacat 255

                                                             
Query: 485 tggttagttgattagtgtgatgagaaaggaaagaaagatttggcagaaac 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tggttagttgattagtgtgatgagaaaggaaagaaagatttggcagaaac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space:   484176
Effective search space used:   484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)