Query= MSMg01no407_f12.b1 MSMg01no407_f12.b1 CHROMAT_FILE:
MSMg01no407_f12.b1 PHD_FILE: MSMg01no407_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:57 2005
(586 letters)
>mm_chr3_5934086_5935071
Length = 986
Score = 1123 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Plus
Query: 5 gaattcacatgttgtgtcctacaaacattttccttaattttatccaccactggaaggtag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatgttgtgtcctacaaacattttccttaattttatccaccactggaaggtag 264
Query: 65 tcaatttctttagtaatgtgacccttcatagggtgatgacacttccagccattctccagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaatttctttagtaatgtgacccttcatagggtgatgacacttccagccattctccagt 324
Query: 125 ctcgaggatctgtgtagtgaaaacctagattccatgcatttaaattacgaaagaataaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcgaggatctgtgtagtgaaaacctagattccatgcatttaaattacgaaagaataaaa 384
Query: 185 ctcaaacttgggtatttatcaaagtgatagtaaagacgatagaactgagaaaagatggag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcaaacttgggtatttatcaaagtgatagtaaagacgatagaactgagaaaagatggag 444
Query: 245 aaagaatcaatacagctaaaattcattatataaaattctcaaagaattcagaacatatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagaatcaatacagctaaaattcattatataaaattctcaaagaattcagaacatatta 504
Query: 305 attttaaataatttgaggttacattaagattattgtcatgtgcaaatggaaacccatttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attttaaataatttgaggttacattaagattattgtcatgtgcaaatggaaacccatttc 564
Query: 365 agaatacagataagtaccatctatttattactagaaattcttgatgatgatgatgatgat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaatacagataagtaccatctatttattactagaaattcttgatgatgatgatgatgat 624
Query: 425 gacagatcatatatagtagacagatatggatacatagatacatagagacagtatattctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacagatcatatatagtagacagatatggatacatagatacatagagacagtatattctt 684
Query: 485 gtgacatgatgatatttggatgatggtatttatatgtctatagctggatcaatatatcaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgacatgatgatatttggatgatggtatttatatgtctatagctggatcaatatatcaa 744
Query: 545 tagatagaaacatagaaaggataacctttatctgttaatta 585
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tagatagaaacatagaaaggataacctttatctgttaatta 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_f12.g1 MSMg01no407_f12.g1 CHROMAT_FILE:
MSMg01no407_f12.g1 PHD_FILE: MSMg01no407_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:57 2005
(516 letters)
>mm_chr3_6113729_6114644
Length = 916
Score = 967 bits (500), Expect = 0.0
Identities = 512/516 (99%)
Strand = Plus / Minus
Query: 1 acttgatgctggtccctgttttgtttaaatcttttgccccaaagctactcaaatcccaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 716 acttgatgctggtccctgttttgtttaaatcttttgccccaaagctactcaattcccaaa 657
Query: 61 acttacagtagacaaatacacattgacttagaacaagaggaaaagtttcaaccaacaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acttacagtagacaaatacacattgacttagaacaagaggaaaagtttcaaccaacaagg 597
Query: 121 ggaaatgtctcttgcgcaacttgaattatcatctttactatttttgggtatgtactaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ggaaatgtctcttgcgcaacttgaattatcatctttactatttttgggtatgtactaaaa 537
Query: 181 cactcatttttcaacgtgctaattaaatttccacaaatgcagtgagcctttaaccacatt 240
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cattcatttttcaaagtgctaattaaatttccacaaatgcagtgagcctttaaccacatt 477
Query: 241 ataaggagaaatattatatgataaagtagttgtgatttaagaaacaaggatcctatttag 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 476 ataaggagaaatattatatgataaagtagtcgtgatttaagaaacaaggatcctatttag 417
Query: 301 gtatttctgtacaactttctaaaaacaataaaaattatttttctttcttattataggacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtatttctgtacaactttctaaaaacaataaaaattatttttctttcttattataggacc 357
Query: 361 tgaagtaataagtgaaatataatcctcattaatttccccccagctgtatataaatcaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgaagtaataagtgaaatataatcctcattaatttccccccagctgtatataaatcaata 297
Query: 421 gctgtagcatcccaaaggaaatgcacactgcatggtcctgcaagttcctaatgaatgcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gctgtagcatcccaaaggaaatgcacactgcatggtcctgcaagttcctaatgaatgcaa 237
Query: 481 atagaatgacctttttctgacaactatgaatactgt 516
||||||||||||||||||||||||||||||||||||
Sbjct: 236 atagaatgacctttttctgacaactatgaatactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
