XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGACGATCCGCGGAATT
CTTAAAAATTCTGAATGGTATAAGATGGAACCTCAAACATATATTGATTT
TCATTTCTATGGACTTGGNAATTTTCTTTAANGGCTCCATGGCCATTAAA
AATTCCCTTGAAATNCATGGTTAACTTTGACGAATTAATNNNNNTATNNT
NNNTCCCGACCACCAANANNTNNGAAAACCAAACCCCAAANCCNNNAAAA
AAAACGAACCCNNCCTNTACAGGGGAGGNTTGCGTGGNNNNCTNNNNNNN
NCNAAAAGGGAGGGGGGGGGGGGCGGGGGCGGGGGGGGCGGGGGGGGGGC
GGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGCGGGGGGGCGGGGGGGGCG
GGGGCGGGGGGGGGGGGGCCGGGGGGGGGGGGGCGGAGGGGCGGGAGGGC
GCGGGGGGGGGGGGGGGGGGGAGGGGGGCGGGGGGGGGGGGGGCTNNNNC
CNNNNNNNNAANNNNANGGCAGGNCCGGGGCCGGGGGGNGGGCGGGGGGG
CGGGGGGGGGGGCGGGTGGGGGGGGGGGGCTGTTGGGAGTGTGGGANNNT
GCTGCGGGGGGGGGGGAGCTGGTTGGGGGGGGCGGCCTGCCCCCTGGGCT
GGGGTGTTGGGGGTGGGGGGGGAGAGGAGGGGCTGGGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNN
ANAANNAAAAAAAGAGAGAAGAAATG

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTAAAGATTGTGGCCTTTTGATCACT
AAACTGCTTAATATCTAATGTAGAAAGTATATGCTTATATTTATTACACT
GTTATACTAATTTGAGTGTTCCTTCTAGAGTCAGCTATAGGAAGTTACTG
AGTTTTTTGTTCATTGATGATTTAATAAAAATTAATAAACTATGTTTCCC
TTACCCACAGGTTTACCATTTAAAAGCTTGCTTTCAGGGAAGAATATATA
CTTGCTGATAATGGTAATAAAAATTTGTTTTCTCATGATATGAATGATTA
ACTGATAAGTGTTCAGCATTATTAACTGGGTCTATCAAAATGCCTTCCAA
AATTTGTAAGCTTTTTCACCTTTTTTGATTGCTACAAACATGTCTATAAG
ACCAATTTGTCATGTTTCAATGAAAGATTAGCTTTTAATAGGATAAAGTA
ATTCAATTGTCATGTCTGAGCTATGACAGTTATTTGTGAAAAATTTGCCT
GTCATCCATGGGAAGAAAAAACCTTTTGTCCTTGGAAGGTTCAACCCCCC
CGGGAATGGAATAGCCCTGTCAGGTAATTTCATTGTGTGTGTCGTTTTTA
CCATTTATCTTTTTTCCCCTTCCTCTTTATTATTCAGTCAATCCATAAAC
TCTCTTTTTACCACCCTATTTATCTGCTTCTTCTTTCTCTCTTATATTTT
CCTTTTCTTTTTTTCTTTC

Query= MSMg01no407_j24.g1 MSMg01no407_j24.g1 CHROMAT_FILE:
MSMg01no407_j24.g1 PHD_FILE: MSMg01no407_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:19 2005
         (415 letters)



>mm_chr3_72225262_72226077
          Length = 816

 Score =  729 bits (377), Expect = 0.0
 Identities = 407/417 (97%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaagattgtggccttttgatcactaaactgcttaatatctaatgtagaaagtatatgct 60
           ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 201 taaagattgtggccttttgatcaataaactgcttcatatctaatgtagaaagtatatgct 260

                                                                       
Query: 61  tatatttattacactgttatactaatttgagtgttccttctagagtcagctata-ggaag 119
           |||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||
Sbjct: 261 tatatttattacactgttttactaatttgagtgttccttctagagtcagcta-atggaag 319

                                                                       
Query: 120 ttactgagttttttgttcattgatgatttaataaaaattaataaactatgtttcccttac 179
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttactgagtttcttgttcattgatgatttaataaaaattaataaactatgtttcccttac 379

                                                                       
Query: 180 ccacaggtttaccatttaaaagcttgctttcagggaagaatatatacttgctgataatgg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccacaggtttaccatttaaaagcttgctttcagggaagaatatatacttgctgataatgg 439

                                                                       
Query: 240 taataaaaattt-gttttctcatgatatgaatgattaactgataagtgttcagcattatt 298
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taataaaaattttgttttctcatgatatgaatgattaactgataagtgttcagcattatt 499

                                                                       
Query: 299 aactgggtctatcaaaatgccttccaaaatttgtaagctttttcaccttttttgattgct 358
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 aactgggtctatcaaaatgccttccaaaatttgtaagctttttcactttttttgattgct 559

                                                                    
Query: 359 acaaacatgtctataagaccaatttgtcatgtttcaatgaaagattagcttttaata 415
           ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 560 acaaacatgtctataagacgaatttgtcatgtttaaatgaaagattagcttttaata 616


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 816
Length adjustment: 9
Effective length of query: 406
Effective length of database: 807
Effective search space:   327642
Effective search space used:   327642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)