TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCG
GAATTCACTCCTTGTTTGGAGTCTAAAGGTTTTCTGCTCTTTGTGCAGCT
CCCTGCTCTCTGTCCGTTTCGATGTGTGGCTTTGATTCTCTAATACCCAG
GATGTAGTTGGGGTGCTCCTAACATATCTATCCTTGATGTCTCTCTCTGA
GATCCAGACCTTCTTACTGGCTTCACTCCATTACAGTAACCTTCCTTTTG
TTAAAGACCTTTAGTGTATCATCTCAGAATCCTCCTCCTCTGTGTTGTAG
AGACCCTCAGTGTATCTCAGAATCCTCCTCTGTGTTGTAGAGACCCTCAG
TGTATCTGAGAATCCTCCTCCTCTGTGTGGTAGAGACCCTCAGTGTATCT
GAGAATCCTCCTCCTCTTTGTTGTAGAGACCCTCAGTGTATCTGAGAATC
CTCCTCCTCTGTGTGGTAGAGACCCTCAGTGTATCTCAGAATCCTCCTCT
GTGTTGTAGAGACCCTCAGTGTATCTCAGAATCCTCCTCTGTGTTGTAGA
GACCTTCAGTGTATCTGAGAATCCTCCTTCTCTGTGTTGTAGAGACCCTC
ATCGTATCTGAGAATCCCTCCTTCTTTGTGCTGTATATACCTTTCTTTGT
TCCTCATAAGCCTCCTTTTGTGTTTGTAAATAACCCCTCTTGTATTTATA
GAATCCTTCTTCCCCTCGTGGCTGGATAGCCCCCTCCGTGGTTCTTTGAA
AG

CTCTACCCCCCCCCCGTCTTCCCCCCCCTCCCTTCCATATAATTTACTGC
TACACTATACCATACTCTCCTTACCACACCATAAACAACACCAACAGCTA
CAAAACAACTTTTACACACCCCTACCCCCACTCCTTTGTTATCTACANNT
CACAACGATACACAACATCACTACAACCAAAACAAAAAAAGAAATCATGT
CTGCCCAGACACACCCTNCNNCCCCTTGTTTGNNNNNNNNGNNTAGAGAA
AGANNNNCNATAAAAAAAATAAAGAAAAAANNANGAAAAAAGNNNNNNAA
ATAANAAAAAGGNCNNNCAAGATAAAAAAAAAAAAAAAAAAAAAAGAAGN
NNNGGNNGGAGGGGAAATACTATAAAAAAAAAAANNNNNNNNGGGNGCGC
TCCCNNNNNTNNNCCAGACATATTAACAAAATGGGGNTAAANNCCCTTGG
ACGGGANACGGACCCTGGGNTCTCGTGCGCAAAAAATATAAAGGTTGNAA
AAACCTTAATAAAAAAAAGGGTATTTTTCCCCCGCAAAAAAAATATCCCC
CCGCCCAAAACAAAAAAAAAAAAAAAGGGGGGAAAAACCCCCCCCCCAAA
NAANAAAAAGAGGGAAAAAAGCAAAAAAACCCCCCCCCCCCCNTTNATAA
AAAAAAAAAGAAAAAAAAACNGGNNNGGGGTGGGANTGTTTNNNNNCGGC
CCNCCCCCGCCCCTTTCTCTTCCCCCCCCCCCCNNGAAAAAGGGGGGAAA
AACACCCCCCCCGGGGGAAAAATTTTTGTGGGGTCCCCCCCCAAAAAAAA
AAAGAG

Query= MSMg01no408_a04.b1 MSMg01no408_a04.b1 CHROMAT_FILE:
MSMg01no408_a04.b1 PHD_FILE: MSMg01no408_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:50 2005
         (503 letters)



>mm_chr3_152441739_152442653
          Length = 915

 Score =  669 bits (346), Expect = 0.0
 Identities = 404/430 (93%), Gaps = 15/430 (3%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattcactccttgtttggagtctaaaggttttctgctctttgtgcagctccctgctct 65
           ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 117 ggaattcactccttgcttggagtctaaaggttttctgctctttgtgcggctccctgctct 176

                                                                       
Query: 66  ctgtccgtttcgatgtgtggctttgattctctaatacccaggatgtagttggggtgctcc 125
           |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ctgtccattccgatgtgtggctttgattctctaatacccaggatgtagttggggtgctcc 236

                                                                       
Query: 126 taacatatctatccttgatgtctctctctgagatccagaccttcttactggcttcactcc 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 taacatatctatccttgatgtctctctctgagatccagaccttcttactggcttcactcc 296

                                                                       
Query: 186 attacagtaaccttccttttgttaaagacctttagtgtatcatctcagaatcctcctcct 245
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 297 attacagtaaccttccttttgttagagacctttagtgtatcatctcagaatcctcctcct 356

                                                                       
Query: 246 ctgtgttgtagagaccctcagtgtatctcagaatcctcctc-t--gtgttgtagagaccc 302
           |||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||
Sbjct: 357 ctgtgttgtagagaccctcagtgtatctgagaatcctcctcctcagtgttgtagagaccc 416

                                                                       
Query: 303 tcagtgtat----ctgagaatcctcctcctctgtgtggtagagaccctcagtgtat---- 354
           |||||||||    || |||||||||||||||||||| |||||||||||||||||||    
Sbjct: 417 tcagtgtatgtatctcagaatcctcctcctctgtgttgtagagaccctcagtgtatgtat 476

                                                                       
Query: 355 ctgagaatcctcctcctctttgttgtagagaccctcagtgtat----ctgagaatcctcc 410
           || |||||||||||||||| |||||||||||||||||||||||    || ||||||||||
Sbjct: 477 ctcagaatcctcctcctctgtgttgtagagaccctcagtgtatgtatctcagaatcctcc 536

                     
Query: 411 tcctctgtgt 420
           ||||||||||
Sbjct: 537 tcctctgtgt 546



 Score =  101 bits (52), Expect = 1e-25
 Identities = 78/90 (86%), Gaps = 9/90 (10%)
 Strand = Plus / Plus

                                                                       
Query: 423 tagagaccctcagtgtatc---tcagaatcctcctc---tgtgttgtagagaccctcagt 476
           |||||||| | ||||||||   ||||||||||||||   |||||||||||||||||||||
Sbjct: 319 tagagacctttagtgtatcatctcagaatcctcctcctctgtgttgtagagaccctcagt 378

                                         
Query: 477 gtatctcagaatcctcctc-t--gtgttgt 503
           |||||| |||||||||||| |  |||||||
Sbjct: 379 gtatctgagaatcctcctcctcagtgttgt 408


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 2
Length of query: 503
Length of database: 915
Length adjustment: 10
Effective length of query: 493
Effective length of database: 905
Effective search space:   446165
Effective search space used:   446165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)