CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGATGTGTCTCGATGACCAGAACATGACAGAAGGCAACTGAGCA
AAAAAAAAAAAGAAAGAAATGGAGTAAGACAGGAACCACGGAGGAAACAG
ATCCTAGCTTTGTGGCCACATAAGAGTTCAGCTCTTACCTTGAATTTTAA
AAAAAAAGTTTGGGAGGGTTGTCTCCTTCAGAAACTTAAACAGAGGGGTT
CTGTGACACAGTTCAAGTTTCTAAAAGCTCATGCCGGATGATTCGTTGAC
AATGGATTCCAAGACAATAAAAAGGGAAGGAGATTTAACTAAGAATTATG
ACGTCTCAGTCAAGGTGGTGAGACATAGCAGACTATGGGCAGATTTTGAA
ATCTGAGCTAAGAATGGCAAATATAGGAGGTGAAAGAATAAAGTCCTTGG
TGATGGTTTCCTGGTCGTCAGGAGCCCTGGGGTGGGGGTGTGGCCTGGAC
ACAGACTACAGAAGGACTAGGCATGGGTGAGAATGACAGGGACTTGAACT
GTACACATGTGGAGATCTATAAGGAGCCTGCTTCCAAGTGGAGCTATTAC
CAGATCCTCCTGGTTAAATCTTACAAAGATACGCCTCCTTACAGGTGTTA
ATATGGAGCCCGCTACTAATTAATCCCCTCCCTCTGGCTGTTGTATATTT
AACACATTTATTAATCTCTATACCCACAATTCCCAACTAGTATTGTCGGG

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTTTGTAAACCAGGCTGATCTTGAA
CTCAATGAGATCTGCCTGCCTCTGTCCTCTGGGTGCTGGAATTAAAGACC
TGTGAAGTCATTAAGAGGTTATAAACAGGACAAAAGGAAATTAAGGGGGA
AACAGCACGCAACTGATGATGACTACTGCACAGCAGTTATGATAAATGCC
AAGGCCAGCCTTGGCCTGAAAGGGGTTCTGAGAGAGCAGTGAGACAAAGG
ACTCTGGTCAAATCCTGGGTCCACGCTCAAGACAGCTTTCCAGACTGCTT
TTTCTTTGTTCTGCTCCAGACAGTTCTCCAAGCAGTTTTCTCTTGGTAGT
CTAAAAATTCTCTGAATAGCTCATCTCTTGCAGATAAGCCCAGCACATTT
TTGTTTGTAAACATTGCAAAAGAATTCTGAGATTTGCCTGCCCCAGTTAA
GCACAGATGATAACTGGTTGGGACCCCTGAAATTACCATTTCTACCTCAC
CTGGGCCTAACTTTGCTCTGGGGAAGGTGGACCCTGAATTTATGAATCTG
CCTGCCCTTGTATGCTTAAACAAAACCTTACCTGGGTGGCTCTCCAAATG
TTTTCTCCTCCTTCCTTAGAATCATTCCGAACAGGTGGCCCTCCAAGTAG
CTGCCTTTACCCCTTTAAGTATTGTGAATCCCTCATACTAAT

Query= MSMg01no408_k02.b1 MSMg01no408_k02.b1 CHROMAT_FILE:
MSMg01no408_k02.b1 PHD_FILE: MSMg01no408_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:40 2005
         (451 letters)



>mm_chr3_132170649_132171499
          Length = 851

 Score =  826 bits (427), Expect = 0.0
 Identities = 442/447 (98%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgatgtgtctcgatgaccagaacatgacagaaggcaactgagcaaaaaaaaaa 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttgatgtgtct-gatgaccagaacatgacagaaggcaactgagcaaaaaaaaaa 264

                                                                       
Query: 65  aagaaagaaatggagtaagacaggaaccacggaggaaacagatcctagctttgtggccac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagaaagaaatggagtaagacaggaaccacggaggaaacagatcctagctttgtggccac 324

                                                                       
Query: 125 ataagagttcagctcttaccttgaattttaaaaaaaaagtttgggagggttgtctccttc 184
           |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||
Sbjct: 325 ataagagttcagctcttaccttgagttttaaaaaaaaagttggggagggttggctccttc 384

                                                                       
Query: 185 agaaacttaaacagaggggttctgtgacacagttcaagtttctaaaagctcatgccggat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaacttaaacagaggggttctgtgacacagttcaagtttctaaaagctcatgccggat 444

                                                                       
Query: 245 gattcgttgacaatggattccaagacaataaaaagggaaggagatttaactaagaattat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gattcgttgacaatggattccaagacaataaaaagggaaggagatttaactaagaattat 504

                                                                       
Query: 305 gacgtctcagtcaaggtggtgagacatagcagactatgggcagattttgaaatctgagct 364
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 gacgtctcagtcaaggtggtgagacatagcagactgtgggcagattttgaaatctgagct 564

                                                                       
Query: 365 aagaatggcaaatataggaggtgaaagaataaagtccttggtgatggtttcctggtcgtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaatggcaaatataggaggtgaaagaataaagtccttggtgatggtttcctggtcgtc 624

                                      
Query: 425 aggagccctggggtgggggtgtggcct 451
           |||||||||||||||||||||||||||
Sbjct: 625 aggagccctggggtgggggtgtggcct 651


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space:   370881
Effective search space used:   370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)