Query= MSMg01no408_m23.b1 MSMg01no408_m23.b1 CHROMAT_FILE:
MSMg01no408_m23.b1 PHD_FILE: MSMg01no408_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:55 2005
(409 letters)
>mm_chr3_94883395_94884203
Length = 809
Score = 791 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Plus
Query: 1 caatgggctggagagatggctcaattgttaagagcaccgactgctcttccagaggtcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgggctggagagatggctcaattgttaagagcaccgactgctcttccagaggtcctg 260
Query: 61 agttcaattcccagcacacacacacatggtggctcacaatcatcagtaaagggatccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttcaattcccagcacacacacacatggtggctcacaatcatcagtaaagggatccaat 320
Query: 121 gccctcttctggtgtgtctgaagacagctacagtgtactcatatgcataaaataagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccctcttctggtgtgtctgaagacagctacagtgtactcatatgcataaaataagtaaa 380
Query: 181 tcttaaaaaaaacaaaaacaaaaggctaagacaataaaatggcttctctgagtcagaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttaaaaaaaacaaaaacaaaaggctaagacaataaaatggcttctctgagtcagaaac 440
Query: 241 ttgagtactttaaagagacttttttatttttattttacgtgcactggtattttgcctgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgagtactttaaagagacttttttatttttattttacgtgcactggtattttgcctgcg 500
Query: 301 agagtgctgcgggccctggaactggatggacagctagagctgacatgtgggtgctgagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagtgctgcgggccctggaactggatggacagctagagctgacatgtgggtgctgagcc 560
Query: 361 cccaaaaaggctttaaaaaccatgtctcattacattatttgttggagtg 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccaaaaaggctttaaaaaccatgtctcattacattatttgttggagtg 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_m23.g1 MSMg01no408_m23.g1 CHROMAT_FILE:
MSMg01no408_m23.g1 PHD_FILE: MSMg01no408_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:55 2005
(394 letters)
>mm_chr3_95076808_95077600
Length = 793
Score = 555 bits (287), Expect = e-162
Identities = 314/329 (95%), Gaps = 11/329 (3%)
Strand = Plus / Minus
Query: 1 tcttattgctttgcaagagtctcgtgttgccaggtgcggtggtctgcacatgcagttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tcttattgctttgcaagagtctcgtgttgccaggtgcggtggtctgcacatgcagttcca 269
Query: 61 gcatgggggaggctaaggcagggtgattctgagtttgaagcaaaactccatcttaaaaaa 120
||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 268 gcaagggggaggctaaggcaggatgattctgagtttgaagcaaaactccatctt-aaaaa 210
Query: 121 caaaacattgccgggtgtg----------ccggcacacgcctttaatcccagcacttgaa 170
||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 209 caaaacattgccgggtgtggtagtgcacaccggcacacgcctttaatcccagcacttgaa 150
Query: 171 aggcaaaagcaggcggatttctgagttccaggccagcgtggtctacaaaggacagccagg 230
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aggcaaaggcaggcggatttctgagttccaggccagcgtggtctacaaaggacagccagg 90
Query: 231 gctacacagagaaaccctgtcttgaaaaacaaaaacaacaaaaaacattacaaaaaaaga 290
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gctacacagagaaaccctgtcttgaaaaacaaaaacaacaaaaaacattacaaaaaaagg 30
Query: 291 aagaaaaggctggagagatggctcggtgg 319
|||||||||||||||||||||||||||||
Sbjct: 29 aagaaaaggctggagagatggctcggtgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 793
Length adjustment: 9
Effective length of query: 385
Effective length of database: 784
Effective search space: 301840
Effective search space used: 301840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
