Query= MSMg01no410_o10.b1 MSMg01no410_o10.b1 CHROMAT_FILE:
MSMg01no410_o10.b1 PHD_FILE: MSMg01no410_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:46 2005
(138 letters)
>mm_chr3_147920323_147920860
Length = 538
Score = 267 bits (138), Expect = 2e-76
Identities = 138/138 (100%)
Strand = Plus / Minus
Query: 1 aaagtataattcagtttagaaaataaatctccaaacagttacattgtctggataaacgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aaagtataattcagtttagaaaataaatctccaaacagttacattgtctggataaacgtt 279
Query: 61 tatgatgggtttttgtgtataggtttttaaaagttgcagtattcagtattattttaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tatgatgggtttttgtgtataggtttttaaaagttgcagtattcagtattattttaagat 219
Query: 121 tgttgatctctcttgagt 138
||||||||||||||||||
Sbjct: 218 tgttgatctctcttgagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 538
Length adjustment: 8
Effective length of query: 130
Effective length of database: 530
Effective search space: 68900
Effective search space used: 68900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_o10.g1 MSMg01no410_o10.g1 CHROMAT_FILE:
MSMg01no410_o10.g1 PHD_FILE: MSMg01no410_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:46 2005
(339 letters)
>mm_chr3_147747210_147747938
Length = 729
Score = 449 bits (232), Expect = e-130
Identities = 309/342 (90%), Gaps = 18/342 (5%)
Strand = Plus / Plus
Query: 1 tttcaaaatttttgtctgaagacctttatgctttaaattttg--aaaaaaatattttgga 58
||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 201 tttcaaattttttgtctgaagacctttatgctttaagttttgaaaaaaaaatattttgga 260
Query: 59 gagttttaagacgg-agtttggtgagttttttgtttgtttgttttcttttcttttgtttc 117
|||||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 261 gagttttaagacggaagtttggtgagttttttgtttttttgt----ttttctttagtttc 316
Query: 118 aattcagttactagaggatatttttcatcatctccacacttgaattagttca-acaacac 176
||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||||||
Sbjct: 317 aattcagttactagaggatgtttttcatcaaatccacacttgaattaattcagacaacac 376
Query: 177 tctttttgtaattcttatttctctataactaaaactttttgtatgtctatttttagaatt 236
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 377 actttctgtaattcttatttctctaaaactaaaactttttgtatgtctatttttagaatt 436
Query: 237 aatattttttatgctatagcataacataatttttgacaagttataacattatacatttag 296
||||||| |||||||||| ||| |||||||||||| ||||| |||||||||||
Sbjct: 437 aatatttcttatgctata--ata---taatttttgacatgttat-----tatacatttag 486
Query: 297 ttttaatatgctttaatataaatcccctgtccttatgcttta 338
||||||||||||||||||||||||||||||| || |||||||
Sbjct: 487 ttttaatatgctttaatataaatcccctgtcattgtgcttta 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 729
Length adjustment: 9
Effective length of query: 330
Effective length of database: 720
Effective search space: 237600
Effective search space used: 237600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
