Query= MSMg01no411_h01.b1 MSMg01no411_h01.b1 CHROMAT_FILE:
MSMg01no411_h01.b1 PHD_FILE: MSMg01no411_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:29 2005
(644 letters)
>mm_chr3_63069564_63070608
Length = 1045
Score = 1162 bits (601), Expect = 0.0
Identities = 631/641 (98%), Gaps = 1/641 (0%)
Strand = Plus / Minus
Query: 5 gaattctcatttttccac-ctgttcaccaccactattgttcccatggtgtgaaggtacat 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gaattctcatttttctacactgttcaccaccactattgttcccatggtgtgaaggtacat 676
Query: 64 tactatagaaatatgtggttagcttggggaaaagcacagcagacattctgagagtaagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tactatagaaatatgtggttagcttggggaaaagcacagcagacattctgagagtaagaa 616
Query: 124 atacaaactatttcctagcaatgtgccagggcagatatgtcaatgagggatcatctacca 183
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 615 atacaaactatttcctagcaatgtgccagggcagatatgtcaatgagggaacatctaccg 556
Query: 184 ggaagtaggtaaagctaggcaagttgacaaatcagagtcaccattcaagtaaacacatct 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggaattaggtaaagctaggcaagttgacaaatcagagtcaccattcaagtaaacacatct 496
Query: 244 gcacatctctttgaagatccagcacaaagtatactatgacagcaaacagttgtcatctga 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 495 gcacatctctttgaagatccagcacaaagtatactaggacagcaaacagttgtcatctga 436
Query: 304 gaggccagggatttgcagaactacaggtggactcagttactctttatgatccagtgattt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaggccagggatttgcagaactacaggtggactcagttactctttatgatccagtgattt 376
Query: 364 acagttgaaaacatacaataaaagcctagatggaaagacagaaggtgacagttggaaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acagttgaaaacatacaataaaagcctagatggaaagacagaaggtgacagttggaaaaa 316
Query: 424 atagtaagaattgatgggctgcatcccacccatagcgcatgttgaaacatatgcacaaac 483
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 315 atagtaagaattgatgggctgcatcccacccatagtgcatgttgaaacatatgcacaaac 256
Query: 484 agaaaacgaactatagccttgtctggaggaatgaaccgagacactgtggtggtttgaata 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 255 agaaaacgaactatagccttgtctggaggaatgaactgagacactgtggtggtttgaata 196
Query: 544 tgctgggcctagggagtggcactattaagagatatggccttgctggaaaagatgtggtct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 195 tgctgggcctagggagtggcactattaagagatatggccttgctggaaaagatgtggcct 136
Query: 604 tgttggaggaagtatgtcacagtgcggctggactttgagac 644
|||||||||||||||||||||||| ||||||||||||||||
Sbjct: 135 tgttggaggaagtatgtcacagtggggctggactttgagac 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space: 656190
Effective search space used: 656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_h01.g1 MSMg01no411_h01.g1 CHROMAT_FILE:
MSMg01no411_h01.g1 PHD_FILE: MSMg01no411_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:29 2005
(251 letters)
>mm_chr3_62844240_62844890
Length = 651
Score = 458 bits (237), Expect = e-133
Identities = 249/255 (97%), Gaps = 4/255 (1%)
Strand = Plus / Plus
Query: 1 acttgtatgagtcttgttgaaatttaaaatctttgtaataactagaaagtttctattggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgtatgagtcttgttgaaatttaaaatctttgtaataactagaaagtttctattggc 260
Query: 61 acttctgttgcaatttaatatgtttaccaagtagtttaaagtgaatgcacattattaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttctgttgcaatttaatatgtttaccaagtagtttaaagtgaatgcacattattaaat 320
Query: 121 atttagtatttcatgctggagatcagctcagcagtagattgctggcttcacatgggcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttagtatttcatgctggagatcagctcagcagtagattgctggcttcacatgggcaag 380
Query: 181 actttatgtttcattcctagtacaaagagaagacagatgacagacagacagacaga---- 236
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 actttatgtttcattcctagtacaaagaggagacagatgacagacagacagacagacaga 440
Query: 237 aattttaaacattaa 251
|| ||||||||||||
Sbjct: 441 aaatttaaacattaa 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
