Query= MSMg01no411_m12.b1 MSMg01no411_m12.b1 CHROMAT_FILE:
MSMg01no411_m12.b1 PHD_FILE: MSMg01no411_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:57 2005
(191 letters)
>mm_chr3_94596069_94596659
Length = 591
Score = 352 bits (182), Expect = e-102
Identities = 188/190 (98%)
Strand = Plus / Plus
Query: 2 ttttttttcagagttgttaaaacaacattctgaatagagagccagcttttccccacacac 61
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 202 ttttttttcagagttgttaaaacaacattctgagtagagagccagcttttccccacacac 261
Query: 62 ccaaacaacagctgattccaccccgcatctcttcccttctgtcagtgaaggagacaagct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccaaacaacagctgattccaccccgcatctcttcccttctgtcagtgaaggagacaagct 321
Query: 122 tggcacctgagatctgcatacacacccccagctcctcaggatccctccagacttccctgt 181
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 322 tggcacctgagatctgcatacacacccccagctcctcaggatccctccagtcttccctgt 381
Query: 182 ctattgtggc 191
||||||||||
Sbjct: 382 ctattgtggc 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no411_m12.g1 MSMg01no411_m12.g1 CHROMAT_FILE:
MSMg01no411_m12.g1 PHD_FILE: MSMg01no411_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:57 2005
(466 letters)
>mm_chr3_94791489_94792354
Length = 866
Score = 857 bits (443), Expect = 0.0
Identities = 461/467 (98%), Gaps = 2/467 (0%)
Strand = Plus / Minus
Query: 1 ctagagcaagaaggcagtggccattgcactctgttctatagctagcatttcaagcctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctagagcaagaaggcagtggccattgcactctgttctatagctagcatttcaagcctctg 607
Query: 61 cttaattcaattctatgactgaagttcttgatagaggcactacatttgggttttcctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cttaattcaattctatgactgaagttcttgatagaggcactacatttgggttttcctcaa 547
Query: 121 gaatttaggcagaagatcatttgcagggtgtagtcacacttggaaacaccctgctaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaatttaggcagaagatcatttgcagggtgtagtcacacttggaaacaccctgctaaggc 487
Query: 181 tacaactcttctactttgggtagaagtgggaaggaaagaggcagtgaagatgtcagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tacaactcttctactttgggtagaagtgggaaggaaagaggcagtgaagatgtcagaatc 427
Query: 241 cggtant-atctgctggtccaacttctatactcatgctagttgcataagaaaaaaggcag 299
| || | |||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 426 tgtta-taatctgctggtccaacttctatacttatgctagttgcagaagaaaaaaggcag 368
Query: 300 aaaattggcctagctgatcctctcccagacaggccccagtgggctcattaatgtccatgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaattggcctagctgatcctctcccagacaggccccagtgggctcattaatgtccatgg 308
Query: 360 cagacagtagggtctcatgatctgttctcctcctactccctgggcctgagtcacttgtac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cagacagtagggtctcatgatctgttctcctcctactccctgggcctgagtcacttgtac 248
Query: 420 tgagtcagcttcagggagtgaagctgaagccaggagctgacatcaca 466
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgagtcagcttcagggagtgaagctgaagccaggagctgacatcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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