Query= MSMg01no412_c17.b1 MSMg01no412_c17.b1 CHROMAT_FILE:
MSMg01no412_c17.b1 PHD_FILE: MSMg01no412_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:27 2005
(465 letters)
>mm_chr3_60329202_60330065
Length = 864
Score = 878 bits (454), Expect = 0.0
Identities = 462/465 (99%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 1 ctttgcagtattacctcaagcagagcaatttcatgaaattaattaccaaatgtgtacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgcagtattacctcaagcagagcaatttcatgaaattaattaccaaatgtgtacaga 260
Query: 61 ttgatgtccattctccgtattcactctcttacccgcctaatcataaacatgctgattatc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgatgtccattctccctattcactctcttacccgcctaatcataaacatgctgattatc 320
Query: 121 atctctgcctatgttctagtgatcaatttacagacatgtttataatttttagttgtaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctctgcctatgttctagtgatcaatttacagacatgtttataatttttagttgtaact 380
Query: 181 tttgaataacatctcttatatggaatgaaaataaaatagacaaaagtatgagctacaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgaataacatctcttatatggaatgaaaataaaatagacaaaagtatgagctacaggc 440
Query: 241 aaaattttaattaatatatgcttcatatatctggttttttatcaatatgaattaaatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaattttaattaatatatgcttcatatatctggttttttatcaatatgaattaaatcac 500
Query: 301 acatatgttaaacatataataatatctgttgtgttttaagatctagggtttgaggagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 acatatgttaaacatataataatatctgttgtgttttaagatctagggttt-aggagaaa 559
Query: 361 ttgataatataccttgctgtcagggagatggtaattttaggcagaaggacctaaagtgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgataatataccttgctgtcagggagatggtaattttaggcagaaggacctaaagtgag 619
Query: 421 aaacatatttatgggatggaattgtggtgtgttgntgctcatggt 465
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 aaacatatttatgggatggaattgtggtgtgttgttgctcatggt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 864
Length adjustment: 10
Effective length of query: 455
Effective length of database: 854
Effective search space: 388570
Effective search space used: 388570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_c17.g1 MSMg01no412_c17.g1 CHROMAT_FILE:
MSMg01no412_c17.g1 PHD_FILE: MSMg01no412_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:27 2005
(453 letters)
>mm_chr3_60503716_60504567
Length = 852
Score = 799 bits (413), Expect = 0.0
Identities = 443/453 (97%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 1 cttatgcacatgagcacttgattagaagaacggcaatgagaaatgaaaggtatctcgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 652 cttatgcacatgagcacttgattagaagaacggcaatgagaaatgaaaggtatctcgaga 593
Query: 61 aagtttgttccagagtgatgctatcatgttacaacaagcacagtgtgaacctcaggctga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aagattgttccagagtgatgctatcatgttacaacaagcacagtgtgaacctcaggctga 533
Query: 121 ctcactaatcactagaaaacaactctaatcagtgcaatgtgactctaactttagggcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctcactaatcactagaaaacaactctaatcagtgcaatgtgactctaactttagggcaaa 473
Query: 181 tgtacttgattgaaaatagcatccaattatgaggggggaaagtacaaatgattggcaaga 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 472 tgtacttgattgaaaatagcatccaattatgaagggggaaagtacaaatgattggcaaga 413
Query: 241 agatattataacttagacataatggcttgatttattgctagaagaaatgagtgacttaaa 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agatattaaaacttagacataatggcttgatttattgctagaagaaatgagtgacttaaa 353
Query: 301 actcccagattgttttaactaccttgaacttatcctggactctgaagattaaagtcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actcccagattgttttaactaccttgaacttatcctggactctgaagattaaagtcaatt 293
Query: 361 cctgaatatgacagaggaagtgtccactctccatcctactgatgaaacccaatcaaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 292 cctgaatatgacagaggaagtgtccactctccatcctactgatgaaacccaatcagacca 233
Query: 421 acactattttgtcatttggcaatggaatacatt 453
|| ||||| |||| |||||||||||||||||
Sbjct: 232 gcattattt-gtcacctggcaatggaatacatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
