GGGCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTCTTATCACTTCTGGATAAATTGACAAACGATAGGAATGA
GTTCCTTAATAAAATTAATCAACTTCTAACATCTTACAATATGGTAAAGG
ACAACAGTGAACTTAGTAATGAAAATGAATCCATCCATATGTGTGTTCTA
CATTTTAAAGATTTATAAGAGTATCCTGGAAGCAAATTTTCTCAGAAATA
ACCATAGAGTTCAGGTTGTAGAAAATCGAACTGATGCCCTCATTATAAAT
TTTGCTAAATAAGAATGAAATTTCTAATCCCAACTTAGTCATTTAAAGTA
AGAGTATTAATTGGTAGAGAATGGAATCATGTAGTTTGATATGGGAATGT
GTAGGAAGACCCTACTAAATCTGAGAATTTTGAAACCTTGGATTCTCAAG
AATTTATCTCATCTCAGGAAGTAGTCATTTCACCCTTAGGCTCACTGCTT
GAGTTATTGTCTTTTTTACCTTTCACTCAGAAATTAATTCTGATTAATTA
TCTGTTAAACCACCACTGACTTTATCTGAAGGAAATGTCAGGCAGGAAAA
TATTGACGTACTTCAGGACCCACCAATATTTTTCTCTAGATATGTAAATG
CTAAAGATAAAATAGACTCCTACAGGGAAGGCAAAAATTGTATTCTATGA
GTTGGTGTCTACACTACTAAGTACCTTAATGG

NCCACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCATCCCACAGTATTTAAAAA
TCTATGCTGAGATATGAAACATACATTAAACAAATACAAATAATTCCTAG
CCTGTTTCATGACATATGCTTAATGAATGAAAAATAAAGTGGGTTATCAA
AAAAATTCTCAATTAATAATGTTTCCTTGAAATAAATGTAAAACCAAATA
TAATCAGGAAGCTAAGGATAAATCAGACATGGAAGGATGTGCAGAGGGCA
CCAATGACTTTTGATTACAACTTAAACCTAAAGATAAGTAGGTAGAATGG
CTGTTAAATATGAGGTTATTCAAATAAGCAAACAATGCAGAAATAAGTAT
AGCTCTGGACAAGCCTTCAATACACTTTATTTATTAAGAAATACAGTGGA
CAACCTATTCATGATATACTTTGAGAGATTTTTCACTATGTGCAGAATAC
ATGTAAAACTTGAAAGAAATTCTTCTCTTCCTTTAATATATATACTTGAT
TATTTTGTTTGGGTTAGNTTGTTAATGCATATATACTATTCTCTTCAACA
TATTCCTTCACTTACTTATATAAGTATGTCTCATGGACAATCATACTTTG
GGATACTGTTTTGTATAGTGCAAATTTCTTCTTAAAAATCTTATATCTGG
TCATTGAAATATGTTTCAATTTAATTATTTGTTGTTA

Query= MSMg01no412_d09.g1 MSMg01no412_d09.g1 CHROMAT_FILE:
MSMg01no412_d09.g1 PHD_FILE: MSMg01no412_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:30 2005
         (570 letters)



>mm_chr3_12431986_12432956
          Length = 971

 Score = 1052 bits (544), Expect = 0.0
 Identities = 564/571 (98%), Gaps = 1/571 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcatcccacagtatttaaaaatctatgctgagatatgaaacatacattaaacaaataca 60
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 771 ttcatcccacagtatttaaaaatctatgctgagatatgaaacaaaaattaaacaaataca 712

                                                                       
Query: 61  aataattcctagcctgtttcatgacatatgcttaatgaatgaaaaataaagtgggttatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aataattcctagcctgtttcatgacatatgcttaatgaatgaaaaataaagtgggttatc 652

                                                                       
Query: 121 -aaaaaaattctcaattaataatgtttccttgaaataaatgtaaaaccaaatataatcag 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaaaaaaattctcaattaataatgtttccttgaaataaatgtaaaaccaaatataatcag 592

                                                                       
Query: 180 gaagctaaggataaatcagacatggaaggatgtgcagagggcaccaatgacttttgatta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaagctaaggataaatcagacatggaaggatgtgcagagggcaccaatgacttttgatta 532

                                                                       
Query: 240 caacttaaacctaaagataagtaggtagaatggctgttaaatatgaggttattcaaataa 299
           |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 531 caacttaaacctaaagataagtaggtagaatgactgttaaatatggggttattcaaataa 472

                                                                       
Query: 300 gcaaacaatgcagaaataagtatagctctggacaagccttcaatacactttatttattaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gcaaacaatgcagaaataagtatagctctggacaagccttcaatacactttatttattaa 412

                                                                       
Query: 360 gaaatacagtggacaacctattcatgatatactttgagagatttttcactatgtgcagaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaaatacagtggacaacctattcatgatatactttgagagatttttcactatgtgcagaa 352

                                                                       
Query: 420 tacatgtaaaacttgaaagaaattcttctcttcctttaatatatatacttgattattttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tacatgtaaaacttgaaagaaattcttctcttcctttaatatatatacttgattattttg 292

                                                                       
Query: 480 tttgggttagnttgttaatgcatatatactattctcttcaacatattccttcacttactt 539
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttgggttagtttgttaatgcatatatactattctcttcaacatattccttcacttactt 232

                                          
Query: 540 atataagtatgtctcatggacaatcatactt 570
           ||||||||| |||||||||||||||||||||
Sbjct: 231 atataagtacgtctcatggacaatcatactt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space:   538160
Effective search space used:   538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)