XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCAACACACCCAAGTTGGTACTTGAAACCCAGCAGGTAGTTATTTAATGA
TAAACATTAAATAAAGATCAATTACTTTTTACCGCTAAATGATCATTTTT
TGAGTACATACTACATGGCTTGATTGCACTTGACTACTATATGAATGGAG
GTAAAATATTTGTATCTATTTTCTAATTGAGTAATGTTAATTGACTTATA
ATAAATTAGAGAGCTATCAAGTGACATTGGTAGGACCCAAATACACAGCT
GGTGACTACAGATATTATGTATTCTGACTACACTTTAAAGCAACAACAAC
AATCCATTCGGAAGCTGAGCTACAAGCGGTAGGAATGGCTGCCTCTATAT
ATCGTAGAATATTAAAAGACTGGGGAATTGTGGGCCCAGCAATGCAACTG
CACACCATGGATAGGAGTGCCTGCTAAATTGTGTGAGCTCTGCTTTCTGA
CAAGCAATAGTCAAAATCAGCAGAGTATAAAAATGTTGAAGCTCGGTCTA
TGGGAGCAGACAGGGTAGGAATGACGATGATGGTTTGCCTCCCCATGCTT
GAATAGACTTGCTATCAATCGGTGCATTAATTCTGTCTGGCTCCTGGAAA
CAGTCATTTGCTTAATAGTTCTTTTGTGAGCAGGGAGTCTGGCCCAATC

ATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACCAAAGACCTAGGAGGTGAGAGACT
CTCAGTACTCAAAGGGACTACCTTAGAAGAAATCCTCAACAGTAGGAGGT
GGGAACTTACAGTGTCCACCTCCAGCAAAAAGACAGGGCACCAAGTAAGG
GAGAGGGTTGTCATCCCTCAGCCAAAAACTCTGACCCATAATTGTTTCTA
TCTGAAAGAATTGCACAGATGGAAATAGAGGGGAACATGAGGAAATGAAG
GTCCAGTAACAGACCCAAACTTGGATCCGGCTCAAGGGGAGACCCCCAAG
ATCTGACACTTACTGAGGCTATGGAGCACTCACTANNAGGGACTTATTAT
GACTGCACTCAGGAAGGTCCAACAAGCAGCTGAAAGAGTCAAATGCAGAT
ATTTGTATCCAACCAATGGTCAGAAGCTGCTGACCCCTGTGATTGATTTG
GGAAAAGGATGTAAGAAGCTTGAAAAGGAGGCTGTCCCCGGGTGGGTGGA
CCCCCAGCCTCAATTAACCGGGAACCTTGGAAATTTCCCAAAAACTGGGG
GCCCGGTTGAAATTGAAGCCCCCCCCTCCCCTTATATACCCCCTGGGACC
GGGGGGGGTTTATTTGTTTATTCCAAAATTTGGGGTGCCCTTAACCCTCT
CTAAAAAACGGGGG

Query= MSMg01no413_b17.b1 MSMg01no413_b17.b1 CHROMAT_FILE:
MSMg01no413_b17.b1 PHD_FILE: MSMg01no413_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:41 2005
         (658 letters)



>mm_chr3_76232315_76233373
          Length = 1059

 Score = 1243 bits (643), Expect = 0.0
 Identities = 652/655 (99%), Gaps = 1/655 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattc-caacacacccaagttggtacttgaaacccagcaggtagttatttaatgataaa 63
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaacacacccaagttggtacttgaaacccagcaggtagttatttaatgataaa 264

                                                                       
Query: 64  cattaaataaagatcaattactttttaccgctaaatgatcattttttgagtacatactac 123
           ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 cattagataaagatcaattactttttaacgctaaatgatcattttttgagtacatactac 324

                                                                       
Query: 124 atggcttgattgcacttgactactatatgaatggaggtaaaatatttgtatctattttct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atggcttgattgcacttgactactatatgaatggaggtaaaatatttgtatctattttct 384

                                                                       
Query: 184 aattgagtaatgttaattgacttataataaattagagagctatcaagtgacattggtagg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattgagtaatgttaattgacttataataaattagagagctatcaagtgacattggtagg 444

                                                                       
Query: 244 acccaaatacacagctggtgactacagatattatgtattctgactacactttaaagcaac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acccaaatacacagctggtgactacagatattatgtattctgactacactttaaagcaac 504

                                                                       
Query: 304 aacaacaatccattcggaagctgagctacaagcggtaggaatggctgcctctatatatcg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacaacaatccattcggaagctgagctacaagcggtaggaatggctgcctctatatatcg 564

                                                                       
Query: 364 tagaatattaaaagactggggaattgtgggcccagcaatgcaactgcacaccatggatag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagaatattaaaagactggggaattgtgggcccagcaatgcaactgcacaccatggatag 624

                                                                       
Query: 424 gagtgcctgctaaattgtgtgagctctgctttctgacaagcaatagtcaaaatcagcaga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagtgcctgctaaattgtgtgagctctgctttctgacaagcaatagtcaaaatcagcaga 684

                                                                       
Query: 484 gtataaaaatgttgaagctcggtctatgggagcagacagggtaggaatgacgatgatggt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtataaaaatgttgaagctcggtctatgggagcagacagggtaggaatgacgatgatggt 744

                                                                       
Query: 544 ttgcctccccatgcttgaatagacttgctatcaatcggtgcattaattctgtctggctcc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttgcctccccatgcttgaatagacttgctatcaatcggtgcattaattctgtctggctcc 804

                                                                  
Query: 604 tggaaacagtcatttgcttaatagttcttttgtgagcagggagtctggcccaatc 658
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tggaaacagtcatttgcttaatagttcttttgtgagcagggagtctggcccaatc 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1059
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1049
Effective search space:   679752
Effective search space used:   679752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)