XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCA
CACTGCTTTCACTGTAAACAACCCAATGATGTACTGATGAAACATTTTAA
AACAAAAAATTACTGGAAGCTTCCTAACTGATCTTTAAGTAATTTATTAC
AGGATCAAAAATATTTCAATATTTAGCTGGAAATGCAAATGCATGTTTAA
CAAAACACCCATGCTACTCGTAGAAGAGAATAAAAATGAATCGGATATAG
CTTAAAATCATGAATTTCTCTCCTGTTGAACCACAAATGACTTTGGAAGC
TAAAAACAATCATTCTAACATAGCAATTTTCTGCATTACCGCTTGACTTT
CTGCAAATAAATAACCTTTTACATAATATAAAATTGAAAGAAAATAGCAC
TACTAAATAAGATATTTTCACACCTGGTCACCAGGATTAGGAAAGGGAGT
TTATTATCTGTTATTGCCTTTGAAATTTTTTAGCAGCAGATTACTATTAT
AGAAGGACAATATTTTAAGATTGAGTTTTTCAACTATCACCACTGATTTA
GCCAGTTACTCTGCATTTTGCTTAGAATTACAACTAAGTTACTATTTTAG
AACAGCTAGCACCAGTGAATGCAGACTGGCCCATGCCTTGCAGTATAACA
GAGAGAAACCACTGAACCCCTCAGATCACACAGAGTAAAATATCCTTAGG
AATTTACTCACAGAAATATGCTCCACGCG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATTGCATCATTTTCCAACATACTTTTAAAACCA
ACCATGGATCTGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAGGTTTACTTTAAAATACTTAAGCACTTCCTCCCTTTGGA
GTGTATAAAAAAATGCCTTTGAAACACAAAGATCTCTTGTCAGCTTTATA
ACTAGGTGTTAGTTTCACAAGGTCCGGAGAGCCACAGATTAAAGAGGCAT
GTATCAAAGGAGAAGTGACATCCATATCTTCATTTTGAAAGAAGGGTCAT
AACGGAATCATCCTTAAATTCCGTAGGAACTTTCCTTCACGTTACAGAAC
TGCCATGATATAAAGACAGAATGTTCTTTTATTCAGGTTAAAACTCCTTG
GATAGCATAATTGGTGACCCAGTTGTAGGATGATCTAGCTGTTAATGGTC
CTATCTATTTTTCTTACTTGAGTACACATGTATCACAAGCCGGAGCATAA
TACTGTCACCTATGTTACCAAAGGTTTTACCACTGCCTTTGGAACCTCAC
ACTGAACCCATGAAGCACATCACACTCAGATTTACTGTATTTTAGAAATC
TTCCTTCTGAAAAAACTTTCTGAAGGATTTTCTCAGTGGAGAAAAAATTG
GGGTTTAAACTTTCCTCCAACCCGTTAATGAAA

Query= MSMg01no413_g01.b1 MSMg01no413_g01.b1 CHROMAT_FILE:
MSMg01no413_g01.b1 PHD_FILE: MSMg01no413_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:02 2005
         (597 letters)



>mm_chr3_13575549_13576545
          Length = 997

 Score = 1116 bits (577), Expect = 0.0
 Identities = 589/593 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcccacactgctttcactgtaaacaacccaatgatgtactgatgaaacattttaaa 64
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 797 gaattcccacactgctttcactgtaaacaacccaatgatgtattgatgaaacattttaaa 738

                                                                       
Query: 65  acaaaaaattactggaagcttcctaactgatctttaagtaatttattacaggatcaaaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 acaaaaaattactggaagcttcctaactgatctttaagtaatttattacaggatcaaaaa 678

                                                                       
Query: 125 tatttcaatatttagctggaaatgcaaatgcatgtttaacaaaacacccatgctactcgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tatttcaatatttagctggaaatgcaaatgcatgtttaacaaaacacccatgctactcgt 618

                                                                       
Query: 185 agaagagaataaaaatgaatcggatatagcttaaaatcatgaatttctctcctgttgaac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agaagagaataaaaatgaatcggatatagcttaaaatcatgaatttctctcctgttgaac 558

                                                                       
Query: 245 cacaaatgactttggaagctaaaaacaatcattctaacatagcaattttctgcattaccg 304
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 557 cacaaatgactttggaagctaaaaacaatcattcaaacatagcaattttctgcattaccg 498

                                                                       
Query: 305 cttgactttctgcaaataaataaccttttacataatataaaattgaaagaaaatagcact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cttgactttctgcaaataaataaccttttacataatataaaattgaaagaaaatagcact 438

                                                                       
Query: 365 actaaataagatattttcacacctggtcaccaggattaggaaagggagtttattatctgt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 actaaataagatattttcacacctggtcaccaggattaggaaagggagtttattatctgt 378

                                                                       
Query: 425 tattgcctttgaaattttttagcagcagattactattatagaaggacaatattttaagat 484
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tattgactttgaaattttttagcagcagattactattatagaaggacaatattttaagat 318

                                                                       
Query: 485 tgagtttttcaactatcaccactgatttagccagttactctgcattttgcttagaattac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 317 tgagtttttcaactatcaccactgatttagccagttactctgcattttgcttagaattat 258

                                                                
Query: 545 aactaagttactattttagaacagctagcaccagtgaatgcagactggcccat 597
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aactaagttactattttagaacagctagcaccagtgaatgcagactggcccat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)