XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTATTTA
TCTCTATACCCCATTTTTAAATAGGGTTATTTGGTCTCTGGAGTCCAACT
TCTTGAGTTCTTTGTATATGTTGGATATCAGCCCTCTAATATATAGATTT
GGTAAAGATATTTTCTCAATCTGTTGGTTGCCATTTTCTCGTATTGACAG
CGTCCTTTCCCTTACAGAAGCTTTGCGATTTTATGAGGTCCCATTTGTCA
ATTCTTGATCTTAGAGCACAAGCTATTGGTGCTCTGTTCAGGAAATTTTC
CCTGTGCCCATGTGTTTGAGGCTCTTCCCCACTTTCTCTTCTATTAGTTT
CAGTGTTTCTGGTTCTATGTGGAGGTCTTTGATCCGCTTGGACTTAAGCT
TTTTTTCCTCTCACTTTTACAGCAAGTGCCCTTATCCAGTCAGGCATCTC
CCTGTACCCTTAATTATATTATTTTTTAACACTAAGTGTGATTTATGATT
ATTTAAGGGGAATTTTCATCATTTACTAGCTCTATAGAAAGTAATTAAGA
ATTGTGTCTTGTGGNCAGTCCTCCATACATCACAGAAATAATGTAAAAGC
ACAAAACTCAGTTTGTGAGGACTCACTGGAGTTAAAATACATAAGATACT
TATAATATTGCTGGCACCTTCTTTCCCTTTAGTTTTTACTATTCACGATC
TTCCCTTAAAGGATTGTCACAGAGGGGATAAAGGAAAGAAAAATTATACT
TACTTTTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTCTGTTTAGTTCTATACCCCATTTTTGATTAGGTTGTT
TGGTTTTTTGGAGGCCAGCTTCTTGAGTTCTTTCTATATTTTGGATATTA
GCCCTCTATTGAATGTAGGGTTAGTGAAGGTTTTTTTTTTTTCCCCTAAT
CTGTAGGTTGCCAATTTGTCCTATTGACTGTGTCTTTTGCCTTGCAGAAA
CTAATCACTTTCACAAGGTCCCATTTATCAATTCTTGGTCTTAGAACCTG
AGCCATTGACTTTCTGTTTAGGACCGCCCCTCCCACTGGCCCCCCTTTCC
CCATGCCAATGAGTTCAAGGCTCTTTCCCACTTTCTCCTCTATTAGATTC
AGTGTATCTGGTTTTAACTTGCCGTCCTTGATCCACTTGGAGTTGTTTGT
CATTACTTACTGATTTCTTCAAGATAACATGGCCTTTAGTTTGAATTTTC
ATAAGTTGATATGCATGCCATTTTCTGCCCCCCTTTTTGAATATATTTTT
TCCCCTTTAATCCGCCGGCCTTCATTTGGGAAACTTCCCTGGACCCCATT
ATTTTTTTGCCCCTGTTTGGCTCAAACTTGCAAGATCTCCCGGTTAACTA
TATTTCCCCTAAAAAAAAATTTTGGCCCCCTTTTTAAAACCGCCTCTTTA
TAATCTCTTTTTCTCCACCCACCATTTCGGCTCTTCCCCCCTTCCCGAAA
CTTATAGTACCTTTTCTCTCTCTC

Query= MSMg01no413_k17.b1 MSMg01no413_k17.b1 CHROMAT_FILE:
MSMg01no413_k17.b1 PHD_FILE: MSMg01no413_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:25 2005
         (583 letters)



>mm_chr3_67101494_67102476
          Length = 983

 Score =  754 bits (390), Expect = 0.0
 Identities = 407/413 (98%)
 Strand = Plus / Minus

                                                                       
Query: 171 tcctttcccttacagaagctttgcgattttatgaggtcccatttgtcaattcttgatctt 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tcctttcccttacagaagctttgcgattttatgaggtcccatttgtcaattcttgatctt 924

                                                                       
Query: 231 agagcacaagctattggtgctctgttcaggaaattttccctgtgcccatgtgtttgaggc 290
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 agagcacaagctattggtgttctgttcaggaaattttccctgtgcccatgtgtttgaggc 864

                                                                       
Query: 291 tcttccccactttctcttctattagtttcagtgtttctggttctatgtggaggtctttga 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 tcttccccactttctcttctattagtttcagtgtttctggttctatgtggaggtctttga 804

                                                                       
Query: 351 tccgcttggacttaagctttttttcctctcacttttacagcaagtgcccttatccagtca 410
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 803 tccgcttggacttaagctttttttcctctcactttcacagcaagtgcccttatccagtca 744

                                                                       
Query: 411 ggcatctccctgtacccttaattatattattttttaacactaagtgtgatttatgattat 470
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggcatctccctgtacccttagttatattattttttaacactaagtgtgatttatgattat 684

                                                                       
Query: 471 ttaaggggaattttcatcatttactagctctatagaaagtaattaagaattgtgtcttgt 530
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttaaggggaattttcatcacttactagctctatagaaagtaattaagaattgtgtcttgt 624

                                                                
Query: 531 ggncagtcctccatacatcacagaaataatgtaaaagcacaaaactcagtttg 583
           || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggccagtcctctatacatcacagaaataatgtaaaagcacaaaactcagtttg 571


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)