Query= MSMg01no414_h22.b1 MSMg01no414_h22.b1 CHROMAT_FILE:
MSMg01no414_h22.b1 PHD_FILE: MSMg01no414_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:33 2005
(459 letters)
>mm_chr3_141311446_141312304
Length = 859
Score = 826 bits (427), Expect = 0.0
Identities = 448/455 (98%)
Strand = Plus / Minus
Query: 5 gaattcagagacctttcttttattgcttagcttaaatacagtcaattaagtctaaccttt 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 538 gaattcagagacctttcttttattgcttagcttaaatacagccaattaagtctaaccttt 479
Query: 65 ttctgcttagtcagcagagctagaaatctagggataaaacttaattatttcctctccctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttctgcttagtcagcagagctagaaatctagggataaaacttaattatttcctctccctc 419
Query: 125 ccccatcataaccattgcattccaagccctgtcatttatgtctttgaagctccatcctct 184
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 418 tcccatcataaccattgcatttcaagccctgtcatttatgtctttgaagctctatcctcc 359
Query: 185 tcccattcctaccaggtttcagtcaactgctcacaggtgcctttcaattctctagaatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tcccattcctaccaggtttcagtcaactgctcacaggtgcctttcaattctctagaatgg 299
Query: 245 ggtaccaccctatatactcatatgtgttgttttaattacagctcatcgggttaccaactt 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtaccaccctttatactcatatgtgttgttttaattacagctcatcgggttaccaactt 239
Query: 305 tgtctaaagtccttttcagcttactctttatctgtattattaaacttatatttttattat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgtctaaagtccttttcagcttactctttatctgtattattaaacttatatttttattat 179
Query: 365 atgcaaagtcctttattacatggctgaagttcaccctctacactctttgtagtattttct 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 178 atgcaaagtcctttattacatggctgaagttcactctctacactctttgtagtattttct 119
Query: 425 taacccactttgaacaaatatgactttatttcttg 459
|||||||||||||||||||||||||||||||||||
Sbjct: 118 taacccactttgaacaaatatgactttatttcttg 84
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_h22.g1 MSMg01no414_h22.g1 CHROMAT_FILE:
MSMg01no414_h22.g1 PHD_FILE: MSMg01no414_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:33 2005
(462 letters)
>mm_chr3_141136885_141137746
Length = 862
Score = 826 bits (427), Expect = 0.0
Identities = 454/465 (97%), Gaps = 5/465 (1%)
Strand = Plus / Plus
Query: 1 ttggggacaattgtcctgagaaagataatttgcttaagtggagctgacttaatagaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttggggacaattgtcctgagaaagataatttgcttaagtggagctgacttaatagaattt 259
Query: 61 tagtgcattgagggaatgtcatcactgtctgcctctccaggtagattgcctgaactaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagtgcattgagggaatgtcatcactgtctgcctctccaggtagattgcctgaactaaat 319
Query: 121 gtttatttctatatcactacaaagcatacatgtatctgtctataaataaatgaaaaggac 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 gtttatttctatatcactacaaagcatacatgtatctatctataaataaatgaaaaggac 379
Query: 181 tctggttaaacagctgccatttacttgcaataacatgattaggaaaagtagaaagatgaa 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtggttaaacagctgccatttacttgcaataacatgattaggaaaagtagaaagatg-- 437
Query: 241 g---tgaagagtttgatctgctgcagtgcccttcccagttgcaagggggggtactttatt 297
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 438 gctgtgaagagtttgatctgctgcagtgcccttcccagttgcaaggaggggtactttatt 497
Query: 298 aaatttattataaataaaataggaaaggcttgcatgttatttttattgaattaagtaagt 357
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaatttattataaataaaaaatgaaaggcttgcatgttatttttattgaattaagtaagt 557
Query: 358 aagttttctagaatattttgcacagaagttttaacacagtaaatacttatacaaagtaag 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aagttttctagaatattttgcacagaagttttaacacagtaaatacttatacaaagtaaa 617
Query: 418 caaatacagtttgataatttcctattaatgtgtgtgtgtgtgtgt 462
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caaatacagtttgataatttcctattaatgtgtgtgtgtgtgtgt 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
