Query= MSMg01no415_g14.b1 MSMg01no415_g14.b1 CHROMAT_FILE:
MSMg01no415_g14.b1 PHD_FILE: MSMg01no415_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:47 2005
(455 letters)
>mm_chr3_58060214_58061068
Length = 855
Score = 729 bits (377), Expect = 0.0
Identities = 434/453 (95%), Gaps = 2/453 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaagttgctctggaggcatctgcaacagcacatgagaacaagactgtaggtgt 63
||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 204 ggaattcaaaggagctctggaggcacctgcaacagcacacgagaacaagactgtaggtgt 263
Query: 64 ctgagacaggatggaactcagcttcactggtaaacatctggatatgtcggacagtagagt 123
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 ccgagacaggatggaactcagcttcactggtaaacatccggatatgtcggacagtagagt 323
Query: 124 caacctagttctctatctccagcctcatattctctgcctgcctgaaataagagcaaatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caacctagttctctatctccagcctcatattctctgcctgcctgaaataagagcaaatat 383
Query: 184 ttgttgaacgtttactatgaatgtttcccagcttttccacaggaagtgatagatgagtga 243
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggttgaacatttactatgaatgtttcccagcttttccacaggaagtgatagatgagtga 443
Query: 244 attttaatctatttttt-aataatgtattttttccataaaataaggtctctgatggctcc 302
||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||||
Sbjct: 444 attttaatctatttttttaataacggaacatttccataaaataaggtctctgatggctcc 503
Query: 303 cctgtacacacacagagggaaggggcatgcatatttagaagttgaaaggtggaccatttc 362
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 cctgtacacacacagagggaaggggcatgcatatttagaagttgaaaggtgaaccatttc 563
Query: 363 ctcacacagcagtcagactgtggctgccattgtattgctgaactataatctatcacacat 422
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcacacaata-tcagactgtggctgccattgtattgctgaactataatctatcacacat 622
Query: 423 ttgagaagcaaactattctcactaagtgagtgt 455
|||||||||||||||||||||||| ||||||||
Sbjct: 623 ttgagaagcaaactattctcactaggtgagtgt 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_g14.g1 MSMg01no415_g14.g1 CHROMAT_FILE:
MSMg01no415_g14.g1 PHD_FILE: MSMg01no415_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:47 2005
(221 letters)
>mm_chr3_58246217_58246837
Length = 621
Score = 427 bits (221), Expect = e-124
Identities = 221/221 (100%)
Strand = Plus / Minus
Query: 1 ataaccctaagaggttattaacaactaagacaactattatctaagaggtaaataacaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataaccctaagaggttattaacaactaagacaactattatctaagaggtaaataacaact 362
Query: 61 acaaagagaagacatctttgtgatttctaaaattaaaactgtgatttcttttaagcaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaaagagaagacatctttgtgatttctaaaattaaaactgtgatttcttttaagcaata 302
Query: 121 cctccttaccattttggaactatggttatattagtactatttaacttatatgaccagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctccttaccattttggaactatggttatattagtactatttaacttatatgaccagaaa 242
Query: 181 tggaagcctatacttataattaggacagctataagaacagc 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaagcctatacttataattaggacagctataagaacagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|