Query= MSMg01no415_m24.b1 MSMg01no415_m24.b1 CHROMAT_FILE:
MSMg01no415_m24.b1 PHD_FILE: MSMg01no415_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:18 2005
(470 letters)
>mm_chr3_25414283_25415152
Length = 870
Score = 613 bits (317), Expect = e-180
Identities = 347/357 (97%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 114 ttgctgtgagccttcactacccctcttttgcagtgaccactatccttgggaagaaaggct 173
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 870 ttgctgtgagccttcactacccctcttttgcagtgtccactgtccttgggaagaaaggct 811
Query: 174 gtactacaacctatttaggcctgagtcctacatagtttcttattttatgcaccttgagca 233
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 810 gtactataacctatttaggcctgagtcctacatagtttcttattttatgcacattgagca 751
Query: 234 gtttgtgatctctgtgttatatagcatctgctgcaacaagatgcttctctggtgaggcct 293
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 750 gtttgtgatctctgtgtta-atagcatctgctgcaacaagatgcttctctggtgagtcct 692
Query: 294 gtgagatgctccgatctgtggcagcagtaagtggattctatgggtttgaaaaaataattt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 691 gtgagatgctccgatctgtggcagcagtaagtggattctatgggtttgaaaaaataaatt 632
Query: 354 ttttgaaatgtacatgaagctggagggaaaatgttgggggagacaggacaaagtaaacag 413
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 631 ttttgaaatgtacatgaaactggagggaaaatgttgggggagacagggcaaagtaaacag 572
Query: 414 gggaataatagagcaaactgtgcatattacgtctgaaacagaaacacaagtttagct 470
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 571 gggaataatagagcaaactgtgcatattatgtctgaaacagaaacacaagtttagct 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_m24.g1 MSMg01no415_m24.g1 CHROMAT_FILE:
MSMg01no415_m24.g1 PHD_FILE: MSMg01no415_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:18 2005
(480 letters)
>mm_chr3_25283907_25284786
Length = 880
Score = 897 bits (464), Expect = 0.0
Identities = 476/480 (99%)
Strand = Plus / Plus
Query: 1 tattccactacaaagattaaaataataccaattctattcaaaatattatgtaaagtagaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattccactacaaagattaaactaataccaattctattcaaaatattatgtaaagtagaa 260
Query: 61 aatgaaggagtgtttctaaatatatctatcacactcaaagcaaaaccaggcaaactctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgaaggagtgtttctaaatatatctatcacactcaaagcaaaaccaggcaaactctta 320
Query: 121 acccaccaatttatagttcaatatttccaatgaacttggtcacaaaaattcttggtaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccaccaatttatagttcaatatttccaatgaacttggtcacaaaaattcttggtaaaa 380
Query: 181 atacctggaaactgtttaagaacactaaagaccttttgaagagtcacttcttacacaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacctggaaactgtttaagaacactaaagaccttttgaagagtcacttcttacacaaat 440
Query: 241 gagtaagtgccgcttctttctaaggtgacactgttttatatgttacttaaacttaggata 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtaagtgccgcttctttccaaggtgacactgttttatatgttacttaaacttaggata 500
Query: 301 gaatatttttgaaattcttcccttctagccatccatattaagacaatgccaccctgcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatatttttgaaattcttcccttctagccatccatattaagacaatgccaccctgcatt 560
Query: 361 gagatacagtctcctttcatgtagcttttgcacccaatagaagaagataagctgctagag 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 gagatacagtctcctttcatgtagctttcccacccaatagaagaagataagctgctagag 620
Query: 421 ggtagggtcaaagatggcaacaatcctttgtgcaccattccattagtatcatctagatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtagggtcaaagatggcaacaatcctttgtgcaccattccattagtatcatctagatca 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
