XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATT
TGGAGACACATAGCGGGGATAGAAGTTTTATGATTGTGATGATGGAGAAA
CAAGACTGCTTATATAAACAGACATTTGAGCAGTAAGAGCTGACATCAAA
TGCTTATTCGGTTTTTTGTGAACTAATTCTAATTGATTCAGTTTGCTTTT
CTAACCCTTTCGGTTCCAACGAACAATGGCAGGGGTTGGTAGAGTTTCTC
TTCTGCTCTATGTGTACAGATGTCCTAGTAAACCAGAGAACACAAATACA
TAAATCATTATATCATCAGTAGTTCTAACTCCTTTCTCACGACAATATTA
TTGTAGATATTAAAATATTAAGCTGATATTCAAATATAAATAAATTCAAC
CTCTTGTATTTTGTCCTTTGTAAAGAATAGAATAAAAATAATGAAGAAGA
AGATGATAGGTCCCAGATGCATATGAACGTGAGAAACAACTGTGCAGTTG
AGTATTGAAACTTGAAAAATTATTTTAGAGTCATTAGTTTTGATCACAAA
TGTACTTTGTGAGAAATTTGGATGTTTGCTGACAATTANGGCGATAGTTA
TGATTGGAATTGCTCGACAGGAACTATAGAACCATGAACTACTTTATCCG
CTCTGCCAACATTGTTTCGATAACATTTTTTAACCTTTAATGATCCTATT
ATTCCTAACCCTATCCGGAATATCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATATTTTGAAATCTTAATGCATAGGATCAAAGA
ATGAGATCTTAGTGATAGATAAGATCTTTATAAGGGTCAAGTGATAGTGA
TTTTACTAGAAGATAACTTATATAATTGGAGTCTTTGTTTAAAAGAGGAA
ATTCAGAGGTAGATGTACACACAGGGAGAGGTAGGTAAAGATGATGTAGA
GCTAAGAGTGATGTTTCTGCTAGCAAAAGAATGGCAATGTTCTCACAAGA
GACAGCTACTTTTTGGTCCTTTCAGCAAATGCTTGCTAGTGTATGCAATG
GTGTCATCGTTTGGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGT
CTGTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTCGGCC
TAGCAAACACATAAGTGTATGCTCACAGTCATCTATTGGATGGATCACAG
GGCTCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAGAGATCTGC
AACCCTGTAGGTGCAACAACATTATGAACTAACCAGTACCCTGGAGCTCT
TGACTCTGCCTGCCTATGTATCATAAGATGGCCTAGTCGTCCATCACTGG
AAAGAGAGGCCCATTGGATATACAAACTTTTTATGCCCCACATCTGTTTA
AAGCCAGTGTCTCTTCCTGGTATTGTG

Query= MSMg01no415_o18.b1 MSMg01no415_o18.b1 CHROMAT_FILE:
MSMg01no415_o18.b1 PHD_FILE: MSMg01no415_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:26 2005
         (514 letters)



>mm_chr3_70389599_70390512
          Length = 914

 Score =  963 bits (498), Expect = 0.0
 Identities = 510/514 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagcggggatagaagttttatgattgtgatgatggagaaacaagactgcttatataaac 60
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagcggggatagaagctctatgattgtgatgatggagaaacaagactgcttatataaac 260

                                                                       
Query: 61  agacatttgagcagtaagagctgacatcaaatgcttattcggttttttgtgaactaattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacatttgagcagtaagagctgacatcaaatgcttattcggttttttgtgaactaattc 320

                                                                       
Query: 121 taattgattcagtttgcttttctaaccctttcggttccaacgaacaatggcaggggttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattgattcagtttgcttttctaaccctttcggttccaacgaacaatggcaggggttgg 380

                                                                       
Query: 181 tagagtttctcttctgctctatgtgtacagatgtcctagtaaaccagagaacacaaatac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagtttctcttctgctctatgtgtacagatgtcctagtaaaccagagaacacaaatac 440

                                                                       
Query: 241 ataaatcattatatcatcagtagttctaactcctttctcacgacaatattattgtagata 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaatcattaaatcatcagtagttctaactcctttctcacgacaatattattgtagata 500

                                                                       
Query: 301 ttaaaatattaagctgatattcaaatataaataaattcaacctcttgtattttgtccttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaaatattaagctgatattcaaatataaataaattcaacctcttgtattttgtccttt 560

                                                                       
Query: 361 gtaaagaatagaataaaaataatgaagaagaagatgataggtcccagatgcatatgaacg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 561 gtaaagaatagaataaaaataatgaagaagaagatgataggtcccagatgcatatgaaca 620

                                                                       
Query: 421 tgagaaacaactgtgcagttgagtattgaaacttgaaaaattattttagagtcattagtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagaaacaactgtgcagttgagtattgaaacttgaaaaattattttagagtcattagtt 680

                                             
Query: 481 ttgatcacaaatgtactttgtgagaaatttggat 514
           ||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgatcacaaatgtactttgtgagaaatttggat 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)