ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCATGGTTGTGTCGCTCATGGCTTTTCTTTTTTTCCTCTTCTGTA
AATAACCCGGTTCCTTTAAATTTCAAAGATACATGATTTATTCCTGTTAT
TTTCATAAATAAGCTGAATAAATGGAAAAATCATAAAATCTCTGTAGCTT
ATGTAGTTTGTGTCACCTTATACAAAAGCTAAAGAACATTGTTAGATTAA
AAAAATCTCTCCTAGAGTCAGGTGGGAAGGTTTTTAGCTTACAATGGTAT
CTTAGTTATTTTCTGTTGCTCTGAAAAAGTACCAGAGAAATAAGGGCTTA
TTTGTGCTTATGGTTCCAGAGGTATAAGAGTCCATAACCATCACAGCAGG
AAAGTATGGCATCAGGAAGACATTTGTGGTCTCTGGAATAGCTGAGGACT
CACAACTTGAACTGTGACCAGGAAGTAGAGAAATTATAGTGGGAATGGCT
CAATACTCTGAAACTTAAGAAACAGAACTCAGGGAGCCTCAGAGTGTAGC
ATTCAGGCAGGAGTTCATCTGAGCCTGCCTGAGTCTGTGGAAGGAGAACT
CAGTCATAGGTGGCTTACTTAAGTCATAAGGTGGTGCAGTATACTCTGAG
TCCGATGACCACCTGGGATCCTAATGAGATTGAAGCCAGTCTGGGCTTGA
TGGTGGAGGATACTATATATGAAGATTATTACTTATAGTCCTAGAGCCGT
GGTAAGTATAGTG

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTT
TAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATAT
ATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTC
CCAATCTGTTGGTGTTCGTTTTGTCTTATTGATGGTGTCTTTTGCCTTGC
AGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACA
GCACAAGCCATTGCTGTTCTGTTCTTTAATTTTTCCCCTGTGCCCATATC
TTCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTT
TTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGGGAT
AAGTATGGATCGATTCGCATTCTTCTAAGTGATAACAACCAATTGTGCCA
GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTC
CCTTGTCGAAGATCAAGTGACCATAGGGGTGCGGGTTCATATCTGGGCCC
TCTATTCTATTCCATTGGTCTATTGGNTTGTCCCTATACCGAACCTTGCA
TGTTTTATCACTATTGCTTTGTCGATAACTTCCTTTCCGCTTGTTGATTC
CCCCCAATTATTCTTTCTTTTTCTTAACCCTTTCCTTCCTTCCTTTTTGG
CTTCTTTTTTCGCATTTT

Query= MSMg01no418_m21.b1 MSMg01no418_m21.b1 CHROMAT_FILE:
MSMg01no418_m21.b1 PHD_FILE: MSMg01no418_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:06 2005
         (548 letters)



>mm_chr3_20422387_20423334
          Length = 948

 Score = 1007 bits (521), Expect = 0.0
 Identities = 539/545 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccatggttgtgtcgctcatggcttttctttttttcctcttctgtaaataacccg 63
           |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 204 ggaattccatggttgtgtggctcatgacttttctttttttcctcttctgtaaataaccgg 263

                                                                       
Query: 64  gttcctttaaatttcaaagatacatgatttattcctgttattttcataaataagctgaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttcctttaaatttcaaagatacatgatttattcctgttattttcataaataagctgaat 323

                                                                       
Query: 124 aaatggaaaaatcataaaatctctgtagcttatgtagtttgtgtcaccttatacaaaagc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatggaaaaatcataaaatctctgtagcttatgtagtttgtgtcaccttatacaaaagc 383

                                                                       
Query: 184 taaagaacattgttagattaaaaaaatctctcctagagtcaggtgggaaggtttttagct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaagaacattgttagattaaaaaaatctctcctagagtcaggtgggaaggtttttagct 443

                                                                       
Query: 244 tacaatggtatcttagttattttctgttgctctgaaaaagtaccagagaaataagggctt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacaatggtatcttagttattttctgttgctctgaaaaagtaccagagaaataagggctt 503

                                                                       
Query: 304 atttgtgcttatggttccagaggtataagagtccataaccatcacagcaggaaagtatgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atttgtgcttatggttccagaggtataagagtccataaccatcacagcaggaaagtatgg 563

                                                                       
Query: 364 catcaggaagacatttgtggtctctggaatagctgaggactcacaacttgaactgtgacc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catcaggaagacatttgtggtctctggaatagctgaggactcacaacttgaactgtgacc 623

                                                                       
Query: 424 aggaagtagagaaattatagtgggaatggctcaatactctgaaacttaagaaacagaact 483
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggacgtagagaaattatagtgggaatggctcaatactctgaaacttaagaaacagaact 683

                                                                       
Query: 484 cagggagcctcagagtgtagcattcaggcaggagttcatctgagcctgcctgagtctgtg 543
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 684 cagggagcctcagagtgtagcattcaggcaggggttcatcttagcctgcctgagtctgtg 743

                
Query: 544 gaagg 548
           |||||
Sbjct: 744 gaagg 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)