Query= MSMg01no420_g19.b1 MSMg01no420_g19.b1 CHROMAT_FILE:
MSMg01no420_g19.b1 PHD_FILE: MSMg01no420_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:16 2005
(165 letters)
>mm_chr3_51672620_51673184
Length = 565
Score = 319 bits (165), Expect = 5e-92
Identities = 165/165 (100%)
Strand = Plus / Minus
Query: 1 aaaaatatccctgggccctggaaggggaagctctctgaagtgtctctcctcccacctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaaaatatccctgggccctggaaggggaagctctctgaagtgtctctcctcccacctcgt 306
Query: 61 ccttcccagaaaacaaacagagaacccagggcttggccacggcttgctatacattggccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ccttcccagaaaacaaacagagaacccagggcttggccacggcttgctatacattggccg 246
Query: 121 tcctcgctggtaggaatctccagctgggaatgacacagatcatag 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tcctcgctggtaggaatctccagctgggaatgacacagatcatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_g19.g1 MSMg01no420_g19.g1 CHROMAT_FILE:
MSMg01no420_g19.g1 PHD_FILE: MSMg01no420_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:16 2005
(522 letters)
>mm_chr3_51501131_51502051
Length = 921
Score = 932 bits (482), Expect = 0.0
Identities = 512/522 (98%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 1 tttagcctttctatacatttttttccttcttctatgttcctaagaagggcagggctatga 60
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tttagcctttctata-atttttttccgtcttctatgttcctaagaagggcagggctatga 259
Query: 61 gtaccttgacagggacaatggtgactttctcaccaataggaaataccaataagtgcttgc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 260 gtaccttgacagggacaatggtgactttctcaccaataggaagtaccaataagtgcttgc 319
Query: 121 tgaattgatggcttctaccttggggaatggtacttacctgctcagccaggatctgctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgaattgatggcttctaccttggggaatggtacttacctgctcagccaggatctgctgct 379
Query: 181 gctgctgctgctgctgttgttgttgctgctgctgttgctgctgctgcctctgctcccgaa 240
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctgctgctgctgctgttgctgctgctgctgctgttgctgctgctgcctctgctcccgaa 439
Query: 241 ggaactgttgcttctggtgctccatcagctgggcccgttgatccatcagcatctgcttca 300
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 440 ggaactgttgcttctggtgctccatcagctgggcccgttggtccattagcatctgcttca 499
Query: 301 tgatggctgcctgtggctggctgcctagaaatccaaggcccccaggactggctccggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgatggctgcctgtggctggctgcctagaaatccaaggcccccaggactggctccggaga 559
Query: 361 ccatgctgcccgaccctgagggcacagagttctgcatagggcccgtggtccggggaatac 420
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 ccatgctgcccgaccccgagggcacagagttctgcatagggcctgtggtccggggaatac 619
Query: 421 caactgcgtgctgctcctagagggaacagaagaaagcagtttagaaattctgctggacca 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cgactgcgtgctgctcctagagggaacagaagaaagcagtttagaaattctgctggacca 679
Query: 481 cttcctgacatttcaggggaaacttctgaggaagggaatgag 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttcctgacatttcaggggaaacttctgaggaagggaatgag 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 921
Length adjustment: 10
Effective length of query: 512
Effective length of database: 911
Effective search space: 466432
Effective search space used: 466432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
