Query= MSMg01no421_g12.b1 MSMg01no421_g12.b1 CHROMAT_FILE:
MSMg01no421_g12.b1 PHD_FILE: MSMg01no421_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:34 2005
(595 letters)
>mm_chr3_54025945_54026939
Length = 995
Score = 1050 bits (543), Expect = 0.0
Identities = 576/599 (96%), Gaps = 22/599 (3%)
Strand = Plus / Plus
Query: 5 gaattcactccggtc-tcacacccatcatcttggctgcacatacaaataattacgagata 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcactccggacatcacacccatcatcttggctgcacatacaaataattacgagata 263
Query: 64 atcaaacttttggttcagaaaggtgtctcagtgcccagaccccacgaggtccgctgtaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcaaacttttggttcagaaaggtgtctcagtgcccagaccccacgaggtccgctgtaac 323
Query: 124 tgtgttgagtgtgtctccagctcggatgtggacagcctcaggcattcacggtccaggctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtgttgagtgtgtctccagctcggatgtggacagcctcaggcattcacggtccaggctc 383
Query: 184 aacatctacaaggccttggccagcccctcgctcattgccctgtcaagcgaagaccctttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacatctacaaggccttggccagcccctcgctcattgccctgtcaagcgaagaccctttc 443
Query: 244 cttactgcctttcagttaagttgggagctttttttt-------ctcagcaaggtggagaa 296
||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 cttactgcctttcagttaagttgggagct-------gcaagaactcagcaaggtggagaa 496
Query: 297 cgaattcaagtcggagtatgaggagctgtctagacagtgcaaacaatttgccaaggacct 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cgaattcaagtcggagtatgaggagctgtctagacagtgcaaacaatttgccaaggacct 556
Query: 357 cctagatcagacacggagttccagagagctggaaatcattcttaattaccgtgatgacaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cctagatcagacacggagttccagagagctggaaatcattcttaattaccgtgatgacaa 616
Query: 417 tagtctgatcgaagaacagagtggaaatgatcttgcaaggctaaaattagccattaagta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tagtctgatcgaagaacagagtggaaatgatcttgcaaggctaaaattagccattaagta 676
Query: 477 ccgtcaaaaagaggtgagtgccgccagacacaatccatcaatgcgatagaatcacatctc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ccgtcaaaaagaggtgagtgccgccagacacaatccatcaatgcgatagaatcacatctc 736
Query: 537 tgacaagcccagtgctactcagaatcagtgttacatttaacagcactttgattctcttg 595
||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 737 tgacaagcccagtgctactcagaatca-------atttaacagcactttgattctcttg 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_g12.g1 MSMg01no421_g12.g1 CHROMAT_FILE:
MSMg01no421_g12.g1 PHD_FILE: MSMg01no421_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:34 2005
(206 letters)
>mm_chr3_54183451_54184056
Length = 606
Score = 391 bits (202), Expect = e-113
Identities = 205/206 (99%)
Strand = Plus / Minus
Query: 1 aatttgagatgaggataaatttcagccaggaagtcatgagctttttgccacagatgtgag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 406 aatttgagatgaggataaatttcagccaggaagtcatgagctttttgcaacagatgtgag 347
Query: 61 ttggtcaacatttaatttttagccttgttttgataattttaaggtaggtttccatgtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttggtcaacatttaatttttagccttgttttgataattttaaggtaggtttccatgtaaa 287
Query: 121 ggttttatgatgaatgtatatcatctcccaagtgaggctatcatggatttaggttggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ggttttatgatgaatgtatatcatctcccaagtgaggctatcatggatttaggttggatg 227
Query: 181 gatggttttatgcttgtttgtttgtt 206
||||||||||||||||||||||||||
Sbjct: 226 gatggttttatgcttgtttgtttgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
