Query= MSMg01no421_j05.b1 MSMg01no421_j05.b1 CHROMAT_FILE:
MSMg01no421_j05.b1 PHD_FILE: MSMg01no421_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:48 2005
(479 letters)
>mm_chr3_97383586_97384464
Length = 879
Score = 640 bits (331), Expect = 0.0
Identities = 370/383 (96%), Gaps = 2/383 (0%)
Strand = Plus / Minus
Query: 98 agttcagacagccctgttatgtcctcacattcccctttatcttatggtcaagctgttccc 157
|||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 879 agttcagatagccctattatgtcttcacattcccctttatcttatggtcaagctgttccc 820
Query: 158 gggaatgttttaactacggggcatacccaggtttgtttttcttttttctcagccccaggc 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 aggaatgttttaactacggggcatacccaggtttgtttttcttttttctcagccccaggc 760
Query: 218 agcctctaggctcacaaacaaccagcaatttatgagtacttt-atatgacttacaggtct 276
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 759 agcctctaggctcacaaacaaccagcaatttatgagta-tttaatatgacttacaggtct 701
Query: 277 tgattttttatctttctttcagtagctgtcccggctgagttctgggccctcggctgtggt 336
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tgaaatttcatctttctttcagtagctgtcccggctgagttctgggccctcggctgtggt 641
Query: 337 ctgtgccgtgctgtgtgtgtaacggtggctctttaatgtctatacatttccagaattcta 396
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 640 ctatgccgtgctgtgtgtgtaatggtggctctttaatgtctatacatttccagaattcta 581
Query: 397 tcacctcctttactagatttgttcttttcattatttctatgagtgtgtgtcggttatttt 456
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 580 tcacctcctttactagatttgttcttttcattatttctatgagtgtgtgtcatttatttt 521
Query: 457 tctagcttttgaattctagtttt 479
|||||||||||||||||||||||
Sbjct: 520 tctagcttttgaattctagtttt 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_j05.g1 MSMg01no421_j05.g1 CHROMAT_FILE:
MSMg01no421_j05.g1 PHD_FILE: MSMg01no421_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:48 2005
(503 letters)
>mm_chr3_97214864_97215764
Length = 901
Score = 915 bits (473), Expect = 0.0
Identities = 495/503 (98%), Gaps = 2/503 (0%)
Strand = Plus / Plus
Query: 1 tgtgacacgtgtgtgattggtcatttcaaatggagtcattgctacagagaacaaaggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgacacgtgtgtgattggtcatttcaaatggagtcattgctacagagaacaaaggatc 260
Query: 61 gagagtaaatatgtacagaagatactgtcaaacatggttctgaattaccagggtcatgtc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 gagagtaaatatgtacagaagatactgacaaacatggttctgaattaccagggtcatgtc 320
Query: 121 cattaaagagtcataaaggtatctggatagtggtcacctgctgggctagccttcatatga 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtaaagagtcataaaggtatctggatagtggtcacctgctgggctagccttcatatga 380
Query: 181 tcagtattttaggccaagccaactttggaccccaggattttccacaaacctgcatggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagtattttaggccaagccaactttggaccccaggattttccacaaacctgcatggctg 440
Query: 241 ataaggggtgagaataaatggaaacacagtcacagccaacactaagccctcaatgcttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaggggtgagaataaatggaaacacagtcacagccaacactaagccctcaatgcttac 500
Query: 301 attgctataagcttgttgtttcctcgtctcaatgctatctctctcttattatcctccttt 360
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attactataaacttgttgtttcctcgtctcaatgctatctctctcttattatcctccttt 560
Query: 361 tttgaaaacatttaatttttctctaaaagacataagttttcattaaaaaaaaaaagcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 tttgaaaacatttaatttttctctaaaagacataagttttcattaaaaaaaaa--gcaga 618
Query: 421 aagaaaatcaaatgaattcagtcacctgcagatcatatcagtactacctctcagagcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagaaaatcaaatgaattcagtcacctgcagatcatatcagtactacctctcagagcatt 678
Query: 481 gcactttagggtgttttctctcc 503
||||||||||| ||||||||||
Sbjct: 679 gcactttagggcattttctctcc 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 901
Length adjustment: 10
Effective length of query: 493
Effective length of database: 891
Effective search space: 439263
Effective search space used: 439263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
