NNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTATCTCCTACCTCACTCCTATGGCATACTCACACGCTGGCCTC
AAACATAACCATACAAAATTGTGTGTGCGTGTGAGCCACTCAAAAACTCT
CAGGTTTTCCTTTTATATGGTCTTCCCCATGTATNNNNNNNNNNNNNNTA
NACCTGATTTGTTANNTGNTAGAAGCCGGGTTTGTGCGGGGCCAGGAAGA
CGAGAGGGGGGGGCTGCGTGGGGGTGGTGGCGGGGTGGGGAGGAGGTGGG
TGGAGGGGAGGGGAGGAGGGTGGTGGGGGGGGGGGGGGGGGGTGTTGCGC
CNNCCCCATAGGACAACAAGGGAGAACCTTCTAAAATTTTTTCCCCCCCA
AAAAATTTGTGTAAAAAATTTTGAAACCCCCCCCCCCTTTTCTCTTCTAT
GTTTTTCCCAANTTNNAAAAAAATTTTTGCACCCCAAAATTTTATTTTTT
TTTTAAAATAATTTTTTCCCCCCCCCCCAAAAAAANANCCCTTTCTTTCT
CTATATCCCCTCTTTCTCCCTCCACCTTTCCCCCNTTCCNNCCCCTTTTT
CNNTTTTNNTNNNCCCTCCCCCCCTTTTTCCCCTCCCCCCTCCCCCCCCT
NCCCTTTCTCTCCCCCCCCTTTATATTTANATATTCCCTTATCTTTTTTT
TTTTCCTCCTTCTTTTTCTTCCTTCTCTCTTCATCTTTCATCTTTCCCTT
TCTTTCTTTTGTGCTTGCTTGGTGGG

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGAGCACTGAGTGTTGACTAGTTT
GAAACTGAAACATACCTTGGGGACGCAATCTTATTGGGGCTCCACATTTC
ATGGCCTTAATTTCCAGCAATCCCATAAGTTTTCACTATAGTGAGTCTTA
ACACCTTTCACAGGGAAGAGAATGATATTGGGGTTACCATTTTGAAGCAA
AGATTCAGCCATGCTGCTTTTCACTCAGGGACTCTAGGCTGTACTCTCTG
AAGACTCACCTGAAGATGGATCTATGACATATGCTTAGACTGAAGGATCT
AAAGACCAACAGCTATTGGAGGTATATATGGGGGAGTCAGTAGGATGCAG
AAAAAATAGATTCATGATTTTCTATAGTTGTATAGCAAAACCCTCTAAAA
TGCTAGTCACTCAAAGCAATGATTAGTGCATTGAATCTTTGAGTCTAGAT
TTTGAGCATATCAGAACTGAGTGATTCTTTTGCTTTGCCTGATGTCTCTG
GGTTGATATTCAGATGGNGGCTGGGTTGAATATAATAAGTCAGAAAGCTT
CACTCATAAATCTTATCCCTTAAAATCTAAGGGGTTTTCAACCTCCCCTA
ATCTGGGAACCCTTTGAAACAATTCCCCATGGGGGGGTGAGCCCCCACCA
AAAAAACCCTTTTGGGGTCCCTCCTAACAAGAATTTTACAATCTGCCCAA
CTATAAGGGGATAATTTGTTTAGGTG

Query= MSMg01no421_p14.g1 MSMg01no421_p14.g1 CHROMAT_FILE:
MSMg01no421_p14.g1 PHD_FILE: MSMg01no421_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:19 2005
         (476 letters)



>mm_chr3_109875767_109876642
          Length = 876

 Score =  913 bits (472), Expect = 0.0
 Identities = 475/476 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgagcactgagtgttgactagtttgaaactgaaacataccttggggacgcaatcttatt 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ctgagcactgagtgttgactagtttgaaactgagacataccttggggacgcaatcttatt 260

                                                                       
Query: 61  ggggctccacatttcatggccttaatttccagcaatcccataagttttcactatagtgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggctccacatttcatggccttaatttccagcaatcccataagttttcactatagtgag 320

                                                                       
Query: 121 tcttaacacctttcacagggaagagaatgatattggggttaccattttgaagcaaagatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttaacacctttcacagggaagagaatgatattggggttaccattttgaagcaaagatt 380

                                                                       
Query: 181 cagccatgctgcttttcactcagggactctaggctgtactctctgaagactcacctgaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagccatgctgcttttcactcagggactctaggctgtactctctgaagactcacctgaag 440

                                                                       
Query: 241 atggatctatgacatatgcttagactgaaggatctaaagaccaacagctattggaggtat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggatctatgacatatgcttagactgaaggatctaaagaccaacagctattggaggtat 500

                                                                       
Query: 301 atatgggggagtcagtaggatgcagaaaaaatagattcatgattttctatagttgtatag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatgggggagtcagtaggatgcagaaaaaatagattcatgattttctatagttgtatag 560

                                                                       
Query: 361 caaaaccctctaaaatgctagtcactcaaagcaatgattagtgcattgaatctttgagtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaccctctaaaatgctagtcactcaaagcaatgattagtgcattgaatctttgagtc 620

                                                                   
Query: 421 tagattttgagcatatcagaactgagtgattcttttgctttgcctgatgtctctgg 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagattttgagcatatcagaactgagtgattcttttgctttgcctgatgtctctgg 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space:   403556
Effective search space used:   403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)