Query= MSMg01no422_b17.b1 MSMg01no422_b17.b1 CHROMAT_FILE:
MSMg01no422_b17.b1 PHD_FILE: MSMg01no422_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:29 2005
(626 letters)
>mm_chr3_130152414_130153440
Length = 1027
Score = 1098 bits (568), Expect = 0.0
Identities = 610/628 (97%), Gaps = 9/628 (1%)
Strand = Plus / Minus
Query: 1 cttaataaaatcttctggagagttctgtggttaagggggatctttaaatatcccttactg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 824 cttaataaaatcttctggagagttccgtggttaagggggatctttaaatatcccttactg 765
Query: 61 gggaagttcttaaattatttagcatgatttcacatgaaatagcatttataaaaattctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gggaagttcttaaattatttagcatgatttcacatgaaatagcatttataaaaattctag 705
Query: 121 caaatgaaacctaagtatacatacatatgctctttgatctaaaaatctcttaccgcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 caaatgaaacctaagtatacatacatatgctctttgatctaaaaatctcttaccgcagtc 645
Query: 181 tgccttaaggggaatgtgaggtactgagtgtcagcctgaaaccatcagatggttttatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 644 tgccttaaggggaatgtgaggtactgagtgtcagcctgaaaccatcagatggtttgacac 585
Query: 241 aagaagatgtttg----agagagacccctgcggttgatgtaagtgaggacagtttggaca 296
||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aagaaga----tgcaaaagagagacccctgcggttgatgtaagtgaggacagtttggaca 529
Query: 297 gcgagtcccgtcaaatgacaggacagaaaagccactgcacataaaagacacaaagaaaat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gcgagtcccgtcaaatgacaggacagaaaagccactgcacataaaagacacaaagaaaat 469
Query: 357 tcagtggctccttaaactgcccggcagcagcgctcagaagcttctgccagaggacatgct 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcagtggctccttaaactgcccggcagcagcgctcagaagcttctgccagaggacatgct 409
Query: 417 ggggttggattttggtttcatttctatccctgtggtcattaagcagggcttcccatgagg 476
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ggggttggatttcggtttcatttctatccctgtggtcattaagcagggcttcccatgagg 349
Query: 477 gccccacaatccactgctgtgctgttttgctgatgtgggggtgttctgagatgttattct 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gccccacaatccactgctgtgctgttttgctgatgtgggggtgttctgagatgttattct 289
Query: 537 ctgccttc-aaacattttaaaccaaatttgcttgttatgattacttcatatattttgtag 595
|||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 288 ctgccttcaaaacattttaaaccaaatttgcttgttaggattatttcatttattttgtag 229
Query: 596 ggacagaaatacttacatagatatatta 623
| |||||||||||||||||||| |||||
Sbjct: 228 gaacagaaatacttacatagatgtatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_b17.g1 MSMg01no422_b17.g1 CHROMAT_FILE:
MSMg01no422_b17.g1 PHD_FILE: MSMg01no422_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:29 2005
(242 letters)
>mm_chr3_130003123_130003764
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 agtggagatatccaatgtcactcaccaccaattcagaacagaatttatacttcttgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggagatatccaatgtcactcaccaccaattcagaacagaatttatacttcttgaaat 260
Query: 61 agccattagtcataagtagtaatccgtatattgggttcctagtcagtgacagcaaagaag 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 agccattagtcataagtagtaatccgtatattgggtttctagtcagtgacagcaaagaag 320
Query: 121 caacagaacccaatgttgaacgtttagtggaactttgatcttatggtgccaggaactctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacagaacccaatgttgaacgtttagtggaactttgatcttatggtgccaggaactctt 380
Query: 181 tcccttataaatatgatttattgtagctatgacccaactcaggagtagtgaaacacaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccttataaatatgatttattgtagctatgacccaactcaggagtagtgaaacacaaag 440
Query: 241 cc 242
||
Sbjct: 441 cc 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
