XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAA
CTGATGACACTCAAGTGGTTGAGAAGCACCTAAAGAACTTTCAACATCCT
TAGTCATCAGGGGAATGCAAATCAAAACAATCCTGAGATTCCACCTCACA
CCAATCAGAATGGCTAAGATCAAAACCATAAGTGACAGCAGATGCTGGCA
AGGATGTGGAGAAAGAATAACATTCCTCCATTGGTGGTGGGATTGCAAGC
TGTTACAACCACTCTGGAAATCAGTCTTGTGGCTCCTCAGAAAATTGAAC
ATAGTACTACTTGAGGACATAGCTATACAACTCCTGGGCATATAACCAGA
AGATTCTCCAACATGTAATAAGGGCACATGCTCCACTATGTTCATGGCAG
CGACATTTATAATAGTCAGAAGCTGAAAAGAGCCCAGACATCTCTCAACA
GAGGAAAGGATACAGAAAATGTGGGATATATGCAGGTTGGAATACTATTT
AGCTATTAAAAACAATGACTTCATGAAATTCAAAGGTAAATGGATAGAAC
TTGAAAATATCATCCTGAGTGAGGTAACCCAGTCACAAAAGAACGCACAT
GGTATGCACTCACTGAAAATTGGATATTAGTCCAAAAGCTTGGAATACCC
AGGATACATTTCCAGACCATATGAAGCTCAAGAAGAAAGAAGACCAAAGT
GTGGATGTTTCAGTGCTTTTTTTTT

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAAGGGCAGCCTGGGTAACTTAGTAAGACTTCAAA
TGAAATATCAAGGATGGGCAAGGGCTATTTCTCAGTGCTAAACTATTTGC
CTGTGACTCATAAGGCCTTGGGTTTATTTCCTAGTATCACTAATAGATAA
ATAAAAATAAATAATAAATAAAATAGGCAAGCAATGAAAAGATAAATGGT
AGAGGTAGTACTTAAGATTAGCCAGAGCATTGTTTTACACTAGATAAAGC
TAATTTTTAGCTGCATTTTGCTAAAGGGCACACACATGCGCACACACATA
CATGTACACGTGCACACAAAGAGTAGAATGGGTGTATTAATGTAGATTGT
GACCATCGTGGGACACTGCAGCTTGACTTAACCATGACCTTCACAGAGGG
AGGCATTCATGCAGTTGGAGAGCAAAGAATGTGTGAGACTTGAGACAGTC
TTCTCTACCAATCCAAGAGATAGCGGACAAGAACTTGGGTGAAGAAGGTA
GAATGGCTCCCATAGAGTTCCCTTAAGTGAAGTGGACTTGGCCTTGTGAT
CCACTATGTTGAATATGAAGGGAAACTGAACTTAAAGCTGGCTCTCAGNT
TCTACGAATAAATGTTTTTGGTCAACAATACTGAAGAACTCTTAGACTGA
CTAAGACAGTGGACTTGGCTGAGTGTGGG

Query= MSMg01no422_d03.g1 MSMg01no422_d03.g1 CHROMAT_FILE:
MSMg01no422_d03.g1 PHD_FILE: MSMg01no422_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:36 2005
         (503 letters)



>mm_chr3_56574689_56575591
          Length = 903

 Score =  861 bits (445), Expect = 0.0
 Identities = 491/515 (95%), Gaps = 16/515 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagggcagcctgggtaacttagtaagacttcaaatgaaatatcaaggatgggcaagggct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aagggcagcctgggtaacttagtaagacttcaaatgaaatatcaaggatgggcaagggct 252

                                                                       
Query: 61  atttctcagtgctaaactatttgcctgtgactcataaggccttgggtttatttcctagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atttctcagtgctaaactatttgcctgtgactcataaggccttgggtttatttcctagta 312

                                                                       
Query: 121 tcactaatagataaataaaaataaataataaataaaataggcaagcaatgaaaagataaa 180
           ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 313 tcactaatacataaataaaaataaataataaataaaataggcaagcaacgaaaagataaa 372

                                                                       
Query: 181 tggtagaggtagtacttaagattagccagagcattgttttacactagataaagctaattt 240
           |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 373 tggtagaggtagtacttaagataagtcagagcattgttttacactagataaagctaattt 432

                                                                       
Query: 241 ttagctgcatttt----gctaaagggcacacacatgcgcacacacatacatgtacacgtg 296
           |||||||||        |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 433 ttagctgca----aaaagctaaagggcacacacatgcgcacacacatacatgtacacatg 488

                                                                       
Query: 297 cacaca--------aagagtagaatgggtgtattaatgtagattgtgaccatcgtgggac 348
           ||||||        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cacacatacacacaaagagtagaatgggtgtattaatgtagattgtgaccatcgtgggac 548

                                                                       
Query: 349 actgcagcttgacttaaccatgaccttcacagagggaggcattcatgcagttggagagca 408
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 549 actgcagcttgacttaaccatgaccttcacagagggaggcattcatgctgttggagagca 608

                                                                       
Query: 409 aagaatgtgtgagacttgagacagtcttctctaccaatccaagagatagcggacaagaac 468
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 609 aagaatgtgtgagacttgagacagtcttctctaccaatccaagagatagcagacaagaac 668

                                              
Query: 469 ttgggtgaagaaggtagaatggctcccatagagtt 503
           ||||||||||||||||||||||||||||| |||||
Sbjct: 669 ttgggtgaagaaggtagaatggctcccatggagtt 703


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)