Query= MSMg01no423_g17.b1 MSMg01no423_g17.b1 CHROMAT_FILE:
MSMg01no423_g17.b1 PHD_FILE: MSMg01no423_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:06 2005
(529 letters)
>mm_chr3_111005393_111006319
Length = 927
Score = 953 bits (493), Expect = 0.0
Identities = 505/509 (99%), Gaps = 2/509 (0%)
Strand = Plus / Plus
Query: 21 atatttttcgctttatccttttcattgcacctatattacccgcttccctttagtttgcct 80
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atatttttcactttatccttttcattgcacctatattacccgcttccctttagtttgcct 280
Query: 81 aaattaagaagcatacccaatatcaccttcatcaggaaaaatgttacactggtttcctcc 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aaattaagaagcatacccaatatcaccttcatcaggaaaaatgttacactggtttcctcc 340
Query: 141 tgatgaatttgaaccaatcacccatattatgataaagaaagaagagctacaaaccacaaa 200
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgatgaacttgaaccaatcacccatattatgataaagaaagaagagctacaaaccacaaa 400
Query: 201 agagccccaatggcacttgatcataatgccacctaattttgaattaaggaactcagcata 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agagccccaatggcacttgatcataatgccacctaattttgaattaaggaactcagcata 460
Query: 261 gtactcaaatgtattatatgataagtatatgtcctaagaaatgtgctactggggaatttc 320
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gtactcaaatgtatta-atgataagtatatgtcctaagaaatgtgctactggggaatttc 519
Query: 321 cttaatttacaaacatagtagactgtattctgccaactaatatgcctaagatatatagtt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cttaatttacaaacatagtagactgtattctgccaactaatatgcctaagatatatagtt 579
Query: 381 atattgggcatttggtacattatggtattgtgctatatcattttgaacatattataacat 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atattgggcatttggtacattatggtattgtgctatatcattttgaacatattataacat 639
Query: 441 tgtttcattttaaattgtgtcattattttgcatgttcttttttcctttttttgaaaaagt 500
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 640 tgtttcattttaaattgtgtcattattttgcatgttcttttttcctttttt-gaaaaagt 698
Query: 501 tggtttaacaagctgggagaatctgagaa 529
|||||||||||||||||||||||||||||
Sbjct: 699 tggtttaacaagctgggagaatctgagaa 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 927
Length adjustment: 10
Effective length of query: 519
Effective length of database: 917
Effective search space: 475923
Effective search space used: 475923
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_g17.g1 MSMg01no423_g17.g1 CHROMAT_FILE:
MSMg01no423_g17.g1 PHD_FILE: MSMg01no423_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:06 2005
(615 letters)
>mm_chr3_111175122_111176135
Length = 1014
Score = 1035 bits (535), Expect = 0.0
Identities = 598/629 (95%), Gaps = 17/629 (2%)
Strand = Plus / Minus
Query: 1 atattgtttagaacagtcattctcagtaagcaagacacagagacaccacaagaggatgga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 632 atattgtttagaacagtcattctcagtaagcaagacacagagactccacaagaggatgga 573
Query: 61 tgatccaatttgtagaaaggtagacatgtataaaccaataaacactcatgcaactaggca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 572 tgatccaatttgcagaaaggtagacatgtataaaccaataaacactcatgcaagtaggca 513
Query: 121 gttaggtgctgggaaatctacagcaggaaacttttgtgcaccaaaagtttaattaaacat 180
|||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 512 gttaggtgttgggagatctacagtaggaaacttttgtgcaccaaaagtttaattaaacat 453
Query: 181 ttctggaggtaagtggtatttttcttgagaactccgtatacgagttttcttgagaaagaa 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 452 ttctggaggtaagtggtatttttcttgagaactccgtatatgagttttcttgagaaataa 393
Query: 241 gttcagtttacatcagaaaggggcagtatcaaacgtcaaggtcatgtacaagcaggaaca 300
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 392 gttcagtttatatcagaaaggggcagtatcaaacgtcaaggtcatgtactagcaggaaca 333
Query: 301 gtgaaggaagctaaatgatcaacagcacaaggtgagtcaaagaataaccagtgataattc 360
||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||
Sbjct: 332 gtgaaggaagctaaatgatcaacagcacaagctgagtcagagaataaccaatgata-ttc 274
Query: 361 acagttttgacttaaaagcaaggaattcttaaacaactgcgcagaaacatgcaaatttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 acagttttgacttaaaagcaaggaattcttaaacaactgcgcagaaacatgcaaatttaa 214
Query: 421 cataaaactgatggtatgtttgcatgtgtgtatat----------------atgaatgta 464
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 213 cataaaactgatggtatgtttgcatgtgtgtatatttgtttttaagtatatatgaatgta 154
Query: 465 catatgtacatatgtatgtaaataaataatggacaaaaatgtccttcttctaaagctaat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 catatgtacatatgtatgtaaataaataatggacaaaaatgtccttcttctaaagctaat 94
Query: 525 attactcaaccttggtttggcaactattatgagaattttaacatggaaaacgtttggttt 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 attactcaaccttggtttggcaactattatgagaattttaacatggaaaacgtttggttt 34
Query: 585 gttaactaaatagatataaaagcaaatca 613
||||| |||||||||||||||||||||||
Sbjct: 33 gttaattaaatagatataaaagcaaatca 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1014
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1004
Effective search space: 607420
Effective search space used: 607420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
