Query= MSMg01no424_g15.b1 MSMg01no424_g15.b1 CHROMAT_FILE:
MSMg01no424_g15.b1 PHD_FILE: MSMg01no424_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:22 2005
(586 letters)
>mm_chr3_134082092_134083077
Length = 986
Score = 1102 bits (570), Expect = 0.0
Identities = 582/586 (99%)
Strand = Plus / Plus
Query: 1 attattttggtgggatggaagattcttcataaatgggaaaggaaaatccagccgcactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attattttggtgggatggaagattcttcataaatgggaaaggaaaatccagccgcactag 260
Query: 61 tagcaatccatgtagcctggtgtaaaggagaagcttctggaaatggcagagtcatgtaag 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcaatccatgtagcctgatgtaaaggagaagcttctggaaatggcagagtcatgtaag 320
Query: 121 tctcacctgtcagtcaactttggcaggagtttcatgggacaagcaaaggcgagtgcctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcacctgtcagtcaactttggcaggagtttcatgggacaagcaaaggcgagtgcctcc 380
Query: 181 aggactgagggaagatagcagaaatgaaataaattccttggttcttatatatttccccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggactgagggaagatagcagaaatgaaataaattccttggttcttatatatttccccaa 440
Query: 241 atgatcacatgacccaggtcagaggattagagaaccccttgaaggcgcatagacctagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgatcacatgacccaggtcagaggattagagaaccccttgaaggcgcatagacctagta 500
Query: 301 aaatgttacttacctctgtgagctgatgagttatagggacatttgaaattccttggagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgttacttacctctgtgagctgatgagttatagggacatttgaaattccttggagac 560
Query: 361 cactaagcctccactaacaacacagaaactggtctccaaagcctaagaagagaggaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactaagcctccactaacaacacagaaactggtctccaaagcctaagaagagaggaaggg 620
Query: 421 cctacaggagagaagaagaaaaaggttgaaaagtgggggctggggcaggtcggtcagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctacaggagagaagaagaaaaaggttgaaaagtgggggctggggcaggtcggtcagcaa 680
Query: 481 cagcagaggaagaggccagcctggtgcacaaagctagtttccctagtgcaacaaaagctg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagcagaggaagaggccagcctggtgcacaaagctagtttccctagtgcaacaaaagctt 740
Query: 541 gtggcagggctatgaggcagtgaattatctcaagcaagtttgagaa 586
||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 741 gtggcagggctgtgaggcagtgaatgatctcaagcaagtttgagaa 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_g15.g1 MSMg01no424_g15.g1 CHROMAT_FILE:
MSMg01no424_g15.g1 PHD_FILE: MSMg01no424_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:22 2005
(482 letters)
>mm_chr3_134273637_134274519
Length = 883
Score = 864 bits (447), Expect = 0.0
Identities = 474/485 (97%), Gaps = 5/485 (1%)
Strand = Plus / Minus
Query: 1 tgtgaactagaaatgaacttctaatggtgtgtgtgtgtgttgaatgtgaatatatccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgtgaactagaaatgaacttctaatggtgtgtgtgtgtgttgaatgtgaatatatccagg 624
Query: 61 aaatgatgacatattaaagttgctgggaaactgaagtctcaatcatacctggaaagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaatgatgacatattaaagttgctgggaaactgaagtctcaatcatacctggaaagcagg 564
Query: 121 tttggtgacactaacaaaatcctcagcagcaacatcaaagcccagaggagtgccctcggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttggtgacactaacaaaatcctcagcagcaacatcaaagcccagaggagtgccctcggg 504
Query: 181 gtgacctgggaatgcctgcttgcttcttcctctaagaagagagtcaatctgttgcttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtgacctgggaatgcctgcttgcttcttcctctaagaagagagtcaatctgttgcttgaa 444
Query: 241 gga---aatattgtctgctttgaaaactacatggttatgcgaatttattcttttcctttc 297
||| || | |||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 443 ggaaagaaaa--gtctgctttgaaaactacatggttgtgcgaatttattctcttcctttc 386
Query: 298 cgtgaattgtagcaatttctgttgcagtttggagttagaatcacacgaagaaaggttgag 357
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgtgaattgtagcaatttctgatgcagtttggagttagaatcacacgaagaaaggttgag 326
Query: 358 actcctcagaagtgtgttgcatcaccattaattcattcaagttgagtttggttgacaatg 417
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actcctcagaagtgcgttgcatcaccattaattcattcaagttgagtttggttgacaatg 266
Query: 418 gggtaaatattctccaaaatgaagattcaagcattcagggcttttgtttctagaaaccaa 477
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 gggtaaatattctccaaaatgaagattcaagtattcagggcttttgtttctagaaaccaa 206
Query: 478 atgga 482
|||||
Sbjct: 205 atgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
