TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCATGACAACCACGGCTAAACAGAGAATCCCTGCCTCGAAAAAACAA
AAAACAATAAACAAATAAAGAGAAAATGAATGACACACAGGCATACAGAA
GAGGACTGGTCCCAAAGACAGCTCTGTCCTAAATATACTAGAGCACATTG
CTTCACAAAATGAATTCTGAACATGCTCTCACATAGTGCATTTGAATATA
CTTTCTAGGTTAACCCCATATGATCACAAGAAACAAAAGGTAACAAGAAG
ATCAGAGTCAGAAGTATATCTCAGACTCATGTCAAAGACAGTCTGGGAGG
CAAACCATGCTTCGGTTTTCAAAGTTCAATAGAGTGGTTCTCCACCTTTT
TAATACTGCGGTTCCTTCATATATATACTTCCTTATGCTGTGTGGTGCCC
CAACCGTAAAACTATTTTTTGCTGCTTCATAACTGAAATGTCCTACTGAT
ATGAATTGTAACATACATTTCTGACTTACAGATAGTCTTAGACAACTCCT
GTGAAATTTGTCACAAGGACTAGCAACCTACAGGTTGCCAACCACAGTGC
CAGCAACTAGGAAAACTAGCCAGCCCCTTGATTTTTACAATGTTGCCTTC
CGTAACTGTGGTAGAATAGATGTGCTCTATTTTAGTGGGCTAAGCATGTG
AGGATCTGTAACACTACCTGGAAACACACATACCAAATTGGATGGAGGAG
TCTATT

NCTTCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGGTCCATGTGTACTT
TTAAGAATATTTATGAACACGAGAATTAGCCAACAATGAGAAGATAGTTG
TAGTTCACTGACTTGGACAAAGTGGTGTGGGCACAGTGGGAGAAATGTGC
TGTCATGTGGCATTGCAGCAGACCAATGTAAAACCTCTGTGCACAGGCAG
GGGACGGTGTGGCTGAGGTCGGTCACCAGGCAAAGTTCTTTAGTTTCTGA
TGCTGAAATTGGTAACCTTTTAATATTGTTTTTGAGATATTTGCAAAAGA
AATTTGAGGATGTTACAAATATACCTAAACTTGAATTCTTGGTTTTATAA
ATATTTAACAATTAATATTTTCCCTACATAAAAACAACAATGCTTAAGCT
GTGGCAAAACCAAGAGTGAAATAAACTCTGTGAGACAGATGAGCATTTGT
GCTTAGGGATGAGGAAGTTACTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTCTTTTCTCTCCTCCTTTCCTCCCCTTCTTTCTCTCCCTTTTTTCTTTT
CTTCTTTTTTTTTCTTTTCTCTTCTTTTTCTTCTTTTTTTCCTTTCTCCT
TCCTTTTCTCCTTTTCTTCCTCCTTCCTTTTTTTTTTTTCCTCTTCTCTT
TTTCTCTTTCCTTTTCTTCTTCTTCCTTTTTTCTCCTTTTT

Query= MSMg01no424_j02.g1 MSMg01no424_j02.g1 CHROMAT_FILE:
MSMg01no424_j02.g1 PHD_FILE: MSMg01no424_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:33 2005
         (468 letters)



>mm_chr3_25422515_25423382
          Length = 868

 Score =  882 bits (456), Expect = 0.0
 Identities = 462/464 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaggtccatgtgtacttttaagaatatttatgaacacgagaattagccaacaatgagaa 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 510 caaggtccatgtgtacttttaagaatatttatgaacacaagaattagccaacaatgagaa 451

                                                                       
Query: 61  gatagttgtagttcactgacttggacaaagtggtgtgggcacagtgggagaaatgtgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gatagttgtagttcactgacttggacaaagtggtgtgggcacagtgggagaaatgtgctg 391

                                                                       
Query: 121 tcatgtggcattgcagcagaccaatgtaaaacctctgtgcacaggcaggggacggtgtgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcatgtggcattgcagcagaccaatgtaaaacctctgtgcacaggcaggggacggtgtgg 331

                                                                       
Query: 181 ctgaggtcggtcaccaggcaaagttctttagtttctgatgctgaaattggtaacctttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctgaggtcggtcaccaggcaaagttctttagtttctgatgctgaaattggtaacctttta 271

                                                                       
Query: 241 atattgtttttgagatatttgcaaaagaaatttgaggatgttacaaatatacctaaactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atattgtttttgagatatttgcaaaagaaatttgaggatgttacaaatatacctaaactt 211

                                                                       
Query: 301 gaattcttggttttataaatatttaacaattaatattttccctacataaaaacaacaatg 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 210 gaattcttggttttataaatatttaacaattaatattttccctatataaaaacaacaatg 151

                                                                       
Query: 361 cttaagctgtggcaaaaccaagagtgaaataaactctgtgagacagatgagcatttgtgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cttaagctgtggcaaaaccaagagtgaaataaactctgtgagacagatgagcatttgtgc 91

                                                       
Query: 421 ttagggatgaggaagttactgtgtgtgtgtgtgtgtgtgtgtgt 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  ttagggatgaggaagttactgtgtgtgtgtgtgtgtgtgtgtgt 47


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)