MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-424M14
Chromosome	3 (Build37)
Map Location	91,025,485 - 91,025,999
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rab13, Jtb, Creb3l4, LOC100042397, Slc39a1, Crtc2, Dennd4b, Gatad2b, Slc27a3, Ints3, Npr1, LOC668141, Ilf2, Snapap, 2500003M10Rik, S100a1, S100a13, S100a14, S100a16, EG628324, S100a3, S100a4, S100a5, S100a6, S100a7a, S100a8, S100a9, LOC668165, LOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
Downstream gene	LOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rab13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68328 MGI:1927232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jtb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23922 MGI:1346082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Creb3l4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78284 MGI:1916603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042397 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042397
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Slc39a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30791 MGI:1353474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crtc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74343 MGI:1921593
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dennd4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229541 MGI:2446201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gatad2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229542 MGI:2443225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc27a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26568 MGI:1347358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ints3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229543 MGI:2140050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Npr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18160 MGI:97371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668141 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ilf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67781 MGI:1915031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snapap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20615 MGI:1333745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2500003M10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66511 MGI:1913761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20193 MGI:1338917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20196 MGI:109581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66166 MGI:1913416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67860 MGI:1915110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628324 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628324 MGI:3646384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	S100a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20197 MGI:1338849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20198 MGI:1330282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20199 MGI:1338915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20200 MGI:1339467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381493 MGI:2687194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20201 MGI:88244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100a9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20202 MGI:1338947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668165 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC383949 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Pglyrp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384997 MGI:2686324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC329706 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:329706
definition	note : apoptosis inhibitor 5 pseudogene pseudo : _no_value

name	EG545541 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545541 MGI:3645655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	LOC635737 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG668174 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668174 MGI:3643780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	LOC668179 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668179
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC635756 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	4930529C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619677 MGI:1922392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 53 ESTs, 3 Proteins

name	9130204L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229550 MGI:2684973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein

name	LOC100042463 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Pglyrp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242100 MGI:2685266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619750 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619750 MGI:3648400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 224 ESTs, 5 Proteins

name	Lor (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16939 MGI:96816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A030004J04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109314 MGI:1925680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sprr2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20755 MGI:1330350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042999 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs pseudo : _no_value

name	Rab13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802134 GeneID:68328 MGI:1927232
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB13, member RAS oncogene family transcript_id : NM_026677.2

name	Jtb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124377999 GeneID:23922 MGI:1346082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : jumping translocation breakpoint transcript_id : NM_206924.2

name	Creb3l4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368602 GeneID:78284 MGI:1916603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cAMP responsive element binding protein 3-like 4 transcript_id : NM_030080.2

name	LOC100042397 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251264 GeneID:100042397
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042397 transcript_id : XM_001478107.1

name	Slc39a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930336 GeneID:30791 MGI:1353474
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (zinc transporter), member 1 transcript_id : NM_013901.1

name	Crtc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037360 GeneID:74343 MGI:1921593
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CREB regulated transcription coactivator 2 transcript_id : NM_028881.1

name	Dennd4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372291 GeneID:229541 MGI:2446201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DENN/MADD domain containing 4B transcript_id : NM_201407.2

name	Gatad2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21314853 GeneID:229542 MGI:2443225
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GATA zinc finger domain containing 2B transcript_id : NM_139304.1

name	Slc27a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83715969 GeneID:26568 MGI:1347358
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 27 (fatty acid transporter), member 3 transcript_id : NM_011988.1

name	Ints3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31652267 GeneID:229543 MGI:2140050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrator complex subunit 3 transcript_id : NM_178876.2

name	Ints3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31652265 GeneID:229543 MGI:2140050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrator complex subunit 3 transcript_id : NM_145540.2

name	Npr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930717 GeneID:18160 MGI:97371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : natriuretic peptide receptor 1 transcript_id : NM_008727.5

name	Ilf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129818 GeneID:67781 MGI:1915031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin enhancer binding factor 2 transcript_id : NM_026374.3

name	Snapap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981593 GeneID:20615 MGI:1333745
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SNAP-associated protein transcript_id : NM_133854.2

name	2500003M10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364263 GeneID:66511 MGI:1913761
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2500003M10 gene transcript_id : NM_023215.4

name	S100a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930760 GeneID:20193 MGI:1338917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A1 transcript_id : NM_011309.3

name	S100a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930756 GeneID:20196 MGI:109581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A13 transcript_id : NM_009113.3

name	S100a14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372173 GeneID:66166 MGI:1913416
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A14 transcript_id : NM_025393.2

name	S100a16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982650 GeneID:67860 MGI:1915110
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A16 transcript_id : NM_026416.2

name	EG628324 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251266 GeneID:628324 MGI:3646384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG628324 transcript_id : XM_001478157.1

name	S100a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130205 GeneID:20197 MGI:1338849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A3 transcript_id : NM_011310.2

name	S100a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859623 GeneID:20198 MGI:1330282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A4 transcript_id : NM_011311.1

name	S100a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930759 GeneID:20199 MGI:1338915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A5 transcript_id : NM_011312.2

name	S100a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930761 GeneID:20200 MGI:1339467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A6 (calcyclin) transcript_id : NM_011313.2

name	S100a7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40786530 GeneID:381493 MGI:2687194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A7A transcript_id : NM_199422.1

name	S100a8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930764 GeneID:20201 MGI:88244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A8 (calgranulin A) transcript_id : NM_013650.2

name	S100a9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893069 GeneID:20202 MGI:1338947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein A9 (calgranulin B) transcript_id : NM_009114.2

name	Pglyrp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402282 GeneID:384997 MGI:2686324
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidoglycan recognition protein 4 transcript_id : NM_207263.1

name	EG545541 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369712 GeneID:545541 MGI:3645655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : predicted gene, EG545541 transcript_id : XM_619923.3

name	LOC635737 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251268 GeneID:635737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Protein S100-A9 (S100 calcium-binding protein A9) (Calgranulin-B) (Neutrophil cytosolic 23 kDa protein) (P23) (BEE22) transcript_id : XM_001478193.1

name	EG668174 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369713 GeneID:668174 MGI:3643780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : predicted gene, EG668174 transcript_id : XM_994762.1

name	LOC635756 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251270 GeneID:635756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to 60S acidic ribosomal protein P1 transcript_id : XM_001478213.1

name	9130204L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251328 GeneID:229550 MGI:2684973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : RIKEN cDNA 9130204L05 gene transcript_id : XM_001479737.1

name	LOC100042463 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251272 GeneID:100042463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to S100 calcium-binding protein; S100RVP transcript_id : XM_001478263.1

name	Pglyrp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361343 GeneID:242100 MGI:2685266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidoglycan recognition protein 3 transcript_id : NM_207247.2

name	EG619750 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251330 GeneID:619750 MGI:3648400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 224 ESTs, 5 Proteins product : predicted gene, EG619750 transcript_id : XM_883948.3

name	Lor (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112293270 GeneID:16939 MGI:96816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : loricrin transcript_id : NM_008508.2

name	A030004J04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125991229 GeneID:109314 MGI:1925680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A030004J04 gene transcript_id : NM_175424.3

name	Sprr2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85785857 GeneID:20755 MGI:1330350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small proline-rich protein 2A transcript_id : NM_011468.4

name	Rab13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311975 CCDS:CCDS17522.1 GeneID:68328 MGI:1927232
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence TAS]; GO:0019897 - extrinsic to plasma membrane [Evidence TAS]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0005923 - tight junction [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAS-associated protein RAB13 protein_id : NP_080953.1

name	Jtb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46049047 CCDS:CCDS17523.1 GeneID:23922 MGI:1346082
definition	codon_start : 1 product : jumping translocation breakpoint protein_id : NP_996807.1

name	Creb3l4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313434 CCDS:CCDS17524.1 GeneID:78284 MGI:1916603
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : (attaching to CRE-like 1 product : androgen-induced basic leucine zipper protein_id : NP_084356.1

name	LOC100042397 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251265 GeneID:100042397
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478157.1

name	Slc39a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930337 CCDS:CCDS17525.1 GeneID:30791 MGI:1353474
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046873 - metal ion transporter activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]; GO:0005385 - zinc ion transporter activity [Evidence IDA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0030001 - metal ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006829 - zinc ion transport [Evidence IDA] codon_start : 1 exception : mismatches in translation note : Zrt/Irt-like protein 1; zinc-iron transporter-like product : solute carrier family 39 (zinc transporter), member 1 protein_id : NP_038929.1

name	Crtc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037361 GeneID:74343 MGI:1921593
definition	codon_start : 1 product : transducer of regulated cAMP response element-binding protein (CREB) 2 protein_id : NP_083157.1

name	Dennd4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372292 GeneID:229541 MGI:2446201
definition	codon_start : 1 product : DENN/MADD domain containing 4B protein_id : NP_958809.2

name	Gatad2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314854 CCDS:CCDS17526.1 GeneID:229542 MGI:2443225
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription repressor p66; transcription repressor p66 beta component of the MeCP1 complex product : transcription repressor p66 component of the MeCP1 complex protein_id : NP_647465.1

name	Slc27a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83715970 CCDS:CCDS17527.1 GeneID:26568 MGI:1347358
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004321 - fatty-acyl-CoA synthase activity [Evidence IMP]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006637 - acyl-CoA metabolism [Evidence IC]; GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0015908 - fatty acid transport [Evidence IMP]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0001676 - long-chain fatty acid metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation note : fatty acid transport protein 3; very long-chain acyl-CoA synthetase homolog 3; mFLJ00207 protein product : solute carrier family 27 member 3 protein_id : NP_036118.1

name	Ints3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31652266 CCDS:CCDS17528.1 GeneID:229543 MGI:2140050
definition	GO_component : GO:0032039 - integrator complex [Evidence ISS] GO_process : GO:0016180 - snRNA processing [Evidence ISS] codon_start : 1 product : integrator complex subunit 3 protein_id : NP_663515.2

name	Ints3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31652268 CCDS:CCDS17528.1 GeneID:229543 MGI:2140050
definition	GO_component : GO:0032039 - integrator complex [Evidence ISS] GO_process : GO:0016180 - snRNA processing [Evidence ISS] codon_start : 1 product : integrator complex subunit 3 protein_id : NP_849207.2

name	Npr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930718 CCDS:CCDS17529.1 GeneID:18160 MGI:97371
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004383 - guanylate cyclase activity [Evidence IMP] [Evidence IDA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008217 - blood pressure regulation [Evidence IMP]; GO:0006182 - cGMP biosynthesis [Evidence IEA]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : Nppa receptor; guanylyl cyclase-A; guanylate cyclase A product : natriuretic peptide receptor 1 protein_id : NP_032753.5

name	Ilf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385872 CCDS:CCDS17530.1 GeneID:67781 MGI:1915031
definition	GO_component : GO:0005730 - nucleolus [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0003725 - double-stranded RNA binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : testis expressed gene 267 product : interleukin enhancer binding factor 2 protein_id : NP_080650.1

name	Snapap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19923056 CCDS:CCDS17531.1 GeneID:20615 MGI:1333745
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0045202 - synapse [Evidence IEA]; GO:0019717 - synaptosome [Evidence IEA] [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0000149 - SNARE binding [Evidence ISS] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0016079 - synaptic vesicle exocytosis [Evidence ISS] codon_start : 1 note : Snapin; synaptosomal-associated protein, 25 kDa, binding protein; synaptosomal-associated protein, binding protein; synaptosomal-associated protein 25 binding protein product : SNAP-associated protein protein_id : NP_598615.1

name	2500003M10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981251 CCDS:CCDS17532.1 GeneID:66511 MGI:1913761
definition	codon_start : 1 product : hypothetical protein LOC66511 protein_id : NP_075704.2

name	S100a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755386 GeneID:20193 MGI:1338917
definition	GO_component : GO:0016529 - sarcoplasmic reticulum [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : S100 calcium binding protein A1 protein_id : NP_035439.1

name	S100a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677835 GeneID:20196 MGI:109581
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : S100 calcium-binding protein A13 product : S100 calcium binding protein A13 protein_id : NP_033139.1

name	S100a14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384776 CCDS:CCDS17535.1 GeneID:66166 MGI:1913416
definition	codon_start : 1 exception : mismatches in translation note : S100 calcium binding protein A15 product : S100 calcium binding protein A14 protein_id : NP_079669.1

name	S100a16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312760 CCDS:CCDS17536.1 GeneID:67860 MGI:1915110
definition	codon_start : 1 product : S100 calcium binding protein A16 protein_id : NP_080692.1

name	EG628324 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251267 GeneID:628324 MGI:3646384
definition	codon_start : 1 product : similar to Protein S100-A2 (S100 calcium-binding protein A2) (Protein S-100L) protein_id : XP_001478207.1

name	S100a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755388 CCDS:CCDS17537.1 GeneID:20197 MGI:1338849
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : S100 calcium binding protein A3 protein_id : NP_035440.1

name	S100a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859624 CCDS:CCDS17538.1 GeneID:20198 MGI:1330282
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IDA] codon_start : 1 function : calsium binding protein note : calvasculin; S100 calcium-binding protein A4 product : S100 calcium binding protein A4 protein_id : NP_035441.1

name	S100a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755390 GeneID:20199 MGI:1338915
definition	GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : S100 calcium binding protein A5 protein_id : NP_035442.1

name	S100a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755392 GeneID:20200 MGI:1339467
definition	GO_component : GO:0005635 - nuclear envelope [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] [Evidence ISS] [Evidence IDA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IDA] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0048146 - positive regulation of fibroblast proliferation [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : calcium binding protein A6 (calcyclin) product : S100 calcium binding protein A6 (calcyclin) protein_id : NP_035443.1

name	S100a7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40786531 CCDS:CCDS17541.1 GeneID:381493 MGI:2687194
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : S100 calcium-binding protein A15; S100 calcium binding protein A7-like 1 product : S100 calcium binding protein A15 protein_id : NP_955454.1

name	S100a8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305453 GeneID:20201 MGI:88244
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA] codon_start : 1 note : chemotactic S100 protein product : S100 calcium binding protein A8 (calgranulin A) protein_id : NP_038678.1

name	S100a9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677837 CCDS:CCDS17543.1 GeneID:20202 MGI:1338947
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0031532 - actin cytoskeleton reorganization [Evidence IMP]; GO:0030595 - leukocyte chemotaxis [Evidence IMP]; GO:0045113 - regulation of integrin biosynthesis [Evidence IMP] codon_start : 1 note : S100 calcium-binding protein A9 (calgranulin B) product : S100 calcium binding protein A9 (calgranulin B) protein_id : NP_033140.1

name	Pglyrp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402283 CCDS:CCDS17544.1 GeneID:384997 MGI:2686324
definition	GO_function : GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0009253 - peptidoglycan catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : peptidoglycan recognition protein 4 protein_id : NP_997146.1

name	EG545541 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63501191 GeneID:545541 MGI:3645655
definition	codon_start : 1 product : similar to Protein S100-A9 (S100 calcium-binding protein A9) (Calgranulin-B) (Neutrophil cytosolic 23 kDa protein) (P23) (BEE22) protein_id : XP_619923.1

name	LOC635737 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251269 GeneID:635737
definition	codon_start : 1 product : similar to Protein S100-A9 (S100 calcium-binding protein A9) (Calgranulin-B) (Neutrophil cytosolic 23 kDa protein) (P23) (BEE22) protein_id : XP_001478243.1

name	EG668174 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369714 GeneID:668174 MGI:3643780
definition	codon_start : 1 product : similar to Protein S100-A9 (S100 calcium-binding protein A9) (Calgranulin-B) (Neutrophil cytosolic 23 kDa protein) (P23) (BEE22) protein_id : XP_999856.1

name	LOC635756 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251271 GeneID:635756
definition	codon_start : 1 product : similar to 60S acidic ribosomal protein P1 protein_id : XP_001478263.1

name	9130204L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251329 GeneID:229550 MGI:2684973
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479787.1

name	LOC100042463 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251273 GeneID:100042463
definition	codon_start : 1 product : similar to S100 calcium-binding protein; S100RVP protein_id : XP_001478313.1

name	Pglyrp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402249 CCDS:CCDS17545.1 GeneID:242100 MGI:2685266
definition	GO_function : GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0009253 - peptidoglycan catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : peptidoglycan recognition protein 3 protein_id : NP_997130.1

name	EG619750 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890314 GeneID:619750 MGI:3648400
definition	codon_start : 1 product : similar to macrophage migration inhibitory factor protein_id : XP_889041.1

name	Lor (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112293271 CCDS:CCDS17546.1 GeneID:16939 MGI:96816
definition	GO_component : GO:0001533 - cornified envelope [Evidence IDA]; GO:0009898 - internal side of plasma membrane [Evidence IDA] GO_function : GO:0005200 - structural constituent of cytoskeleton [Evidence IDA]; GO:0030280 - structural constituent of epidermis [Evidence IDA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0031424 - keratinization [Evidence IEA] codon_start : 1 product : loricrin protein_id : NP_032534.2

name	A030004J04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425138 GeneID:109314 MGI:1925680
definition	codon_start : 1 product : proline rich 9 protein_id : NP_780633.1

name	Sprr2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560549 CCDS:CCDS17548.1 GeneID:20755 MGI:1330350
definition	GO_component : GO:0001533 - cornified envelope [Evidence TAS] [Evidence NAS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0005200 - structural constituent of cytoskeleton [Evidence TAS]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007566 - embryo implantation [Evidence TAS]; GO:0008544 - epidermis development [Evidence NAS]; GO:0031424 - keratinization [Evidence IEA]; GO:0030216 - keratinocyte differentiation [Evidence NAS]; GO:0042698 - menstrual cycle [Evidence TAS]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence TAS] codon_start : 1 product : small proline-rich protein 2A protein_id : NP_035598.2

name	LOC668141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668141
definition	number : 5 pseudo : _no_value

name	LOC668141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668141
definition	number : 4 pseudo : _no_value

name	LOC668141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668141
definition	number : 3 pseudo : _no_value

name	LOC668141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668141
definition	number : 2 pseudo : _no_value

name	LOC668141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668141
definition	number : 1 pseudo : _no_value

name	LOC668165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668165
definition	number : 2 pseudo : _no_value

name	LOC668165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668165
definition	number : 1 pseudo : _no_value

name	LOC383949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383949
definition	number : 1 pseudo : _no_value

name	LOC668179 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668179
definition	number : 3 pseudo : _no_value

name	LOC668179 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668179
definition	number : 2 pseudo : _no_value

name	LOC668179 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668179
definition	number : 1 pseudo : _no_value

name	4930529C04Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251327 GeneID:619677 MGI:1922392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 53 ESTs, 3 Proteins product : RIKEN cDNA 4930529C04 gene transcript_id : XR_034353.1

name	LOC100042999 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251331 GeneID:100042999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_034369.1

clone name	MSMg01-426D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-529O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424M14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124B19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-058F19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-061I09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-475H22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-349A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-319L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-212I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-319L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-546B13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-071D17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091K05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-052K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462A10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262A24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-159C09
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-149F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-424M14.T7 (MSMg01no424_m14.b1)	MSMg01-424M14.TJ (MSMg01no424_m14.g1)
ACC	AG518624	AG518625
length	750	746
length of high quality (start - end)	575 (37 - 611)	503 (74 - 576)
definition	CHROMAT_FILE: MSMg01no424_m14.b1 PHD_FILE: MSMg01no424_m14.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:45:49 2005	CHROMAT_FILE: MSMg01no424_m14.g1 PHD_FILE: MSMg01no424_m14.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:45:50 2005
singlet/doublet	singlet	---
BLAST hit	plural	no hit data
sequence	TCTAGTCTCATGTCACCTATACGACTCACTATTCCGAGAGGATCCGCGGA ATTCATGGATTCATTAAGCAAAGGACAACTCTACTTAAAAACTTGCAAAG CAAAACCTCTCTGTCTGCCATTGTCCATCATTCTGATATTCTGAGTTCCT TATTTATGGCAAGCATTAAATTGAAGCAATAAATGTGTTTCAACTCTTAA GAACAGTTGTTGCTTGGTACATATGGTGGAACAAAAACATCAGTTTTCCA ATGAGTGAGAGAACTTGCCTATTCTCCCCTTCACAGTCAGTAATCACACA CACACACACACACACACACACACACACACACACACACACACACACACACT GCACATACATACACATAAATAAATATACACATAAAATACAATATAGTACA ATACAATACAATACAATTAAATACCCAAGTACCCATTAAAAATACAGAAA AGAGGAGACATCTGTATCACTACTACTATACAAAAGAGAAAATTTCCATC TGAAAAATTTTCAAAGGATGATTGAAACTTGCACACAGATGTCAGACCTT AGAGATGAAATTGAGTGTGGTGTTATATGTCACCTGACTCTACACATGCT TCTATTGGCCTGGGAAGTTTGCGTAAACAATTCCCTACCAATGTTTGAAA GCACTTTTCATGTCTTCTTGAATCCTGCATTTTTTTTTACCTAGATCCCC GGATGAGAGCAGCACACCCACCGAAGAGAGAGCACATCTACAACTAATCC	NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXTTTCTTTAAATCTGAGCCCCAGTTTTT AAAGGAAGGGGTTATATAATTTTTTGGAGTCCTTCTTTTTGGGAAAGGAT CTTTACATATCCTAAATAAGATAGCAGACTAATATCCAATATATATAAAG AACTCAAGAAAATGGACTTATTTTCTGTTTTGCACTCCTCTTTGGTGTGC TTGCTTGTTCCAGTTCTAGAACTTTTGTGTGTCCTTTAAACTGCTGATGT GAAAATTTTGAAATAACTTATAAAGTCATTTATTCCTATGAATGTTGTTC TTAGCACTGCTTACATTGTGTCCCCTCTCTATGGATATGATGTACCTTAA TTTTCAGTGAATACTAGAAACATTTCATTTATTTCTTTATTACTTCACTT ATCACAAGATTAGTCAGTAGAAATTGTTCTATTTCCATTAGAATGTAGTC TTTCAGTGCTTCTCTTATTTTGGAAGTACTGATGACTTTGGGATGATAGG ACAAATTGTTTTATTTGAATTCTTTCTATCACTTGATGCTTGATTGTGAT CAATATGAGATGACATTTTTGAGAACGTACCTCGAGGGTTTGAGCAGACT TTATATTGCTTCGTGCCTACAGGAAATTTATATTCTATTCATGCCTATTA TTTCCATCTTGACCCCCCCGGCCCCTTCGCTTACATATTTCCTTGT
quality values	Open. Hide. 6 6 6 6 7 8 13 15 10 13 10 10 8 11 6 6 6 15 19 23 25 28 41 41 26 22 19 13 13 8 10 10 10 11 11 11 18 27 34 31 31 31 31 31 31 47 47 44 29 23 23 28 32 33 30 19 13 9 9 9 9 9 9 11 18 18 25 34 37 39 41 41 50 53 50 50 50 53 53 59 59 59 59 57 57 57 57 57 53 53 53 68 68 51 51 47 47 47 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 59 59 57 57 59 59 59 68 68 59 59 59 59 59 57 57 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 59 59 59 59 59 59 59 68 68 68 57 57 57 57 57 57 57 57 68 68 57 57 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 57 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 68 57 57 59 59 59 59 59 59 68 68 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 47 47 47 47 41 37 41 36 36 36 40 59 44 41 41 41 43 47 41 41 41 39 37 37 37 43 43 43 40 40 40 39 39 39 39 37 37 39 39 44 59 59 47 47 48 59 48 43 43 43 43 43 39 39 30 39 32 43 43 30 30 20 20 23 27 20 33 33 29 29 37 37 37 37 46 37 37 30 21 21 28 28 14 18 18 34 34 37 39 37 37 28 27 22 27 29 37 32 32 32 39 37 37 36 36 36 37 39 43 34 37 31 31 31 35 30 23 17 11 10 10 12 11 9 14 10 9 9 13 19 19 24 28 24 30 23 15 11 9 9 9 12 11 17 17 18 25 14 14 10 15 17 18 11 11 11 22 23 37 25 34 26 16 8 8 9 11 14 17 30 20 20 11 10 10 12 11 18 23 32 32 31 28 28 29 20 22 14 14 14 26 28 39 59 44 41 19 10 8 8 8 8 12 10 10 9 11 11 11 11 11 6 6 6 6 6 6 9 10 10 10 9 10 8 8 8 8 10 11 11 9 9 9 9 10 9 12 9 9 9 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 11 9 11 11 11	Open. Hide. 0 3 6 8 10 10 10 9 9 23 11 10 10 9 9 15 21 32 35 39 32 31 31 37 32 32 44 35 16 21 9 6 6 6 6 6 8 10 10 10 19 19 37 35 37 27 25 12 11 11 21 21 50 42 39 27 20 9 9 9 9 9 10 18 16 16 30 23 33 33 33 33 33 47 50 42 41 39 39 41 37 37 41 39 39 41 47 50 50 59 50 53 47 50 47 50 59 57 57 57 57 57 57 59 59 59 59 59 57 57 68 68 68 57 59 57 50 50 50 48 48 54 59 59 68 68 54 68 68 57 54 54 57 68 68 68 68 68 68 57 57 57 68 68 68 68 57 50 47 47 47 50 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 54 54 59 59 57 57 52 52 52 57 57 68 68 68 68 68 68 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 43 43 35 24 24 10 10 10 33 38 62 62 62 62 62 62 57 57 57 57 57 57 57 57 52 52 52 57 57 59 59 59 57 39 39 57 57 57 57 57 57 57 57 57 57 57 57 57 43 43 39 39 57 57 57 57 57 57 59 52 52 52 57 59 57 57 57 57 57 52 52 52 57 52 54 52 52 52 41 35 41 41 50 50 57 43 43 35 35 35 43 43 52 47 50 50 37 37 37 50 50 54 57 57 57 57 47 47 48 57 59 57 48 48 48 59 59 57 44 43 37 37 37 44 44 59 44 44 28 36 36 37 37 28 28 22 22 22 36 28 32 28 28 20 20 20 25 19 19 19 23 28 33 31 39 39 30 32 30 32 32 43 43 48 48 48 48 48 36 37 28 28 28 36 36 37 34 31 30 30 37 37 27 34 26 19 13 13 11 11 10 16 16 28 28 32 30 30 35 37 32 39 30 30 30 37 37 39 36 28 28 28 21 18 12 9 9 9 19 21 25 22 28 28 25 30 33 28 24 22 22 22 21 21 18 23 18 19 24 24 24 29 24 24 30 37 37 37 37 31 34 25 25 21 21 15 13 13 22 22 19 12 18 16 13 15 12 12 9 10 9 9 10 9 11 18 18 11 11 13 18 21 16 16 15 10 10 10 10 10 10 15 15 8 8 8 13 13 15 16 10 10 10 10 11 10 8 8 6 6 8 8 11 10 9 9 8 8 8 8 8 10 14 10 9 9 9 9 10 16 13 16 11 11 10 11 11 15 8 8 10 11 10 6 6 6 6 8 8 10 10 12 12 12 24 12 11 11 11 11 11 11 13 10 10 10 11 10 10 9 9 8 8 8 8 8 10 10 8 8 8 8 8 8 13 10 10 13 10 10 11 10 8 7 9 9 11 13 15 8 6 6 6 8 12 8 8 8 8 6 7 10 8 9 9 9 9 9 9 12 14 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no424_m14.b1 MSMg01no424_m14.b1 CHROMAT_FILE:
MSMg01no424_m14.b1 PHD_FILE: MSMg01no424_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:49 2005
         (575 letters)



>mm_chr3_91025273_91026246
          Length = 974

 Score =  375 bits (194), Expect = e-108
 Identities = 441/554 (79%), Gaps = 72/554 (12%)
 Strand = Plus / Plus

                                                                       
Query: 13  gaattcatggattcattaagcaaaggacaactctact--taaaaa--cttgcaaagcaaa 68
           |||||||||||   ||| ||| |||||||||||||||   |||||  ||    |||| ||
Sbjct: 213 gaattcatggagagatt-agccaaggacaactctactcagaaaaatcct----aagc-aa 266

                                                                       
Query: 69  acctctct--gtctgccattgtccatcattctgatattctgagttccttatttatggcaa 126
           ||| ||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 267 acc-ctctgagtctgccattgtccatcattctgatattctgagtaccttattcatggcaa 325

                                                                       
Query: 127 gcattaaattgaagcaataaatgtgtttcaac-tcttaagaacagttgttgcttggtaca 185
           ||||| |||||||||| |||||  |||||| | | ||||||||| ||| |||||||||||
Sbjct: 326 gcattcaattgaagcagtaaataagtttcagcat-ttaagaacatttgctgcttggtaca 384

                                                                       
Query: 186 tatggtggaacaaaaacatcagttttccaatgagtgagagaacttgcctattctcccctt 245
           |||||||| |||||||||||||||||| | ||||||| ||||||||||||||||  | ||
Sbjct: 385 tatggtggtacaaaaacatcagttttctagtgagtgatagaacttgcctattcttgcttt 444

                                                                       
Query: 246 cacagtcagtaatcacacacacacacacac--------acacaca------------cac 285
           ||||||||| ||||||||||||||||||||        |||||||            |||
Sbjct: 445 cacagtcagcaatcacacacacacacacacgcgcacgcacacacaaacatacacactcac 504

                                                                       
Query: 286 acacacacacacacacacacacacacactgcacatacatacacataaataaatatacaca 345
           |||||||||||||||||||||||||||||||| |||||||||     || |||||||| |
Sbjct: 505 acacacacacacacacacacacacacactgcatatacataca-----atcaatatacata 559

                                                                       
Query: 346 taaaatacaatatagtacaatacaatacaatacaattaaatacccaag-tacccattaaa 404
           ||||||| ||||      ||   ||||           | |||| ||| ||||||| |||
Sbjct: 560 taaaataaaata------aa---aata-----------agtacc-aaggtacccatcaaa 598

                                                                       
Query: 405 aatacagaaaagaggagacatctgt-atcactactactatacaaaagagaaa-att-tcc 461
           |||| |||||||||||||||||| | ||||| | |||||||||||||||||| ||| |  
Sbjct: 599 aataaagaaaagaggagacatct-tcatcacaaatactatacaaaagagaaatattgt-- 655

                                                                       
Query: 462 atctgaaaaattttcaaaggatgatt-gaaacttgcacacagatgtcagaccttagagat 520
           || || ||  ||| |||| ||| ||| | | ||||||||||||||||||| ||| |||||
Sbjct: 656 atttgcaaggtttccaaaagat-atttggagcttgcacacagatgtcagaacttggagat 714

                         
Query: 521 gaaattg-agtgtg 533
           ||||| | ||||||
Sbjct: 715 gaaat-gcagtgtg 727


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 974
Length adjustment: 10
Effective length of query: 565
Effective length of database: 964
Effective search space:   544660
Effective search space used:   544660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information