Query= MSMg01no424_o05.b1 MSMg01no424_o05.b1 CHROMAT_FILE:
MSMg01no424_o05.b1 PHD_FILE: MSMg01no424_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:57 2005
(270 letters)
>mm_chr3_66155512_66156182
Length = 671
Score = 489 bits (253), Expect = e-143
Identities = 262/265 (98%), Gaps = 3/265 (1%)
Strand = Plus / Plus
Query: 7 gaattcttttt-ttctttagaaattcttcagaactaaacaaactcttttaaaaagataaa 65
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctttttatt-tttagaaattcttcagaactaaacaaactcttttaaaaagataaa 265
Query: 66 acctttgtttggtgtttctattttgttcatctactttgttagtctatcaccggtttgttc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acctttgtttggtgtttctattttgttcatctactttgttagtctatcaccggtttgttc 325
Query: 126 cttttaaaatataaaaagattcattgtaatgaatgattttt-cttttccccatttatcac 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 326 cttttaaaatataaaaagattcattgtaatgaatgattttttcttttccccatttatcac 385
Query: 185 actgtgttgttttcaaattttggaacttatgactaaatctgctctgagaaatgacattta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 actgtgttgttttcaaattttggaacttatgactaaatctgctctgagaaatgacattta 445
Query: 245 actctttgtgtgccatacttttatt 269
|||||||||||||||||||||||||
Sbjct: 446 actctttgtgtgccatacttttatt 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no424_o05.g1 MSMg01no424_o05.g1 CHROMAT_FILE:
MSMg01no424_o05.g1 PHD_FILE: MSMg01no424_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:57 2005
(356 letters)
>mm_chr3_66317191_66317947
Length = 757
Score = 617 bits (319), Expect = 0.0
Identities = 342/357 (95%), Gaps = 14/357 (3%)
Strand = Plus / Minus
Query: 1 caggatggccagggctaaacagaaaccctgtctcaaaaaacaaagcaaacaaaaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 caggatggccagggctaaacagaaaccctgtctcaaaaaacaaagcaaacaaaaaacaaa 692
Query: 61 aataaaaaacccccaaacgaacaaaagcaaaaacaaaaacaaaaactaaacaagcaaaac 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aataaaaaa-ccccaaacgaacaaaagcaaaaacaaaaacaaaaactaaacaagcaaaac 633
Query: 121 agactaaaaaaaaaaaaaaaaaaacaaacaaacaccaacaaaaaccaaaaaacaaacaaa 180
||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 632 agactaaaaaaaaaaaa------------aaacaccaacaaaaaccaaaaaacaaacaaa 585
Query: 181 caaaaaaccaaaagcaagcaaacaaaagcccactgctttctgtgttaattaaaagacaaa 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 caaaaaaacaaaagcaagcaaacaaaagcccactgctttctgtgttaattaaaagacaaa 525
Query: 241 catacacatttatttc-aaaaaaaagtttgcggttttgaggacaggacacaagggtttgt 299
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 catacacatttatttcaaaaaaaaagtttgcggttttgaggacaggacacaagggtttgt 465
Query: 300 gcccactgaaagagcctctcttttgtttcttattactttacttttggggaggtttgt 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gcccactgaaagagcctctcttttgtttcttattactttacttttggggaggtttgt 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 757
Length adjustment: 9
Effective length of query: 347
Effective length of database: 748
Effective search space: 259556
Effective search space used: 259556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
