Query= MSMg01no425_c19.b1 MSMg01no425_c19.b1 CHROMAT_FILE:
MSMg01no425_c19.b1 PHD_FILE: MSMg01no425_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:19 2005
(637 letters)
>mm_chr3_84132173_84133209
Length = 1037
Score = 1087 bits (562), Expect = 0.0
Identities = 615/634 (97%), Gaps = 4/634 (0%)
Strand = Plus / Plus
Query: 6 ggaattcttggcagtg--tccgctgggcggggtctgggctgagttctggcctcagtgagt 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcttggcagtgggt--gctgggcggggtctgggctgagttctggcctcagtgagt 263
Query: 64 cccatgaacttcctggtacctattccattcagtgtctgtgtctaaatcccccaggtgaga 123
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 cccatgaacttcctggtgcctattccattcagtgtctgtgtccaaatcccccaggtgaga 323
Query: 124 accccaggtgactcccgctgcctcagaataggaaaaggttcacgagagggcaaactccat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accccaggtgactcccgctgcctcagaataggaaaaggttcacgagagggcaaactccat 383
Query: 184 agttagaagaaacttgaagtaactttggaactgataaagtcaggaacttcgaagaccttt 243
|| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 384 agctaggagaaacttgaagtaactttggaactgataaaatcaggaacttcaaagaccttt 443
Query: 244 ggagtggtctggagactctgatagacagtggcccttcttactccagagtcagcatctcta 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 ggagtggtctggagactctgatagacagtggcccttcttaccccagagtcagcatctcta 503
Query: 304 ggtccagccgactgtgggttacaggtatttgagatgcacacacactcactatgatcagcc 363
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 504 ggtccagccgactgtgggttaaaggtatttgagatgcacacacactcacgatgatcagcc 563
Query: 364 cctgaacagcacaacagagccatatttgcttaccattatgttgagcattgtaagtgactc 423
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttgaacagcacaacagagccatatttgcttaccattatgttgagcattgtaagtgactc 623
Query: 424 agcgctaacattaaagtacatgagagtattgcgtaggttttatgcaaatatatacagtta 483
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 624 agcgctagcattaaagtacatgagagtattgcataggttttatgcaaatatatacagtta 683
Query: 484 tatacatgactgaacaattgtgggtttgggtatcagagtagttgcaggaattcaggctcc 543
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatacatgactgaacatttgtgggtttgggtatcagagtagttgcaggaattcaggctcc 743
Query: 544 atagacactgaagggcacctgcgttccttagaaggaacatagacctctgactcggcactt 603
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 744 atagacactgaagggcacctgcattccttagaaggaacatagacctctgactcggcactt 803
Query: 604 cctgttgtaggagttcatctccggaaaccttccc 637
||||||||||||||||||||| ||||||||||||
Sbjct: 804 cctgttgtaggagttcatctctggaaaccttccc 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_c19.g1 MSMg01no425_c19.g1 CHROMAT_FILE:
MSMg01no425_c19.g1 PHD_FILE: MSMg01no425_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:19 2005
(497 letters)
>mm_chr3_84349497_84350393
Length = 897
Score = 938 bits (485), Expect = 0.0
Identities = 494/497 (99%)
Strand = Plus / Minus
Query: 1 attcagtttcatgagaaagccattcatgtctcttagaagcctcactttaacattacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 attcagtttcatgagaaagccattcatgtctcttagaagcctcactttaacattacagca 498
Query: 61 taaatggcagcatgaatttcacccaggacagaccacagttacactagttatttattttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 taaatggcagcatgaatttcacccaggacagaccacagttacactagttatttattttac 438
Query: 121 ttgacaattactttaattgggcttctgagcatgtgtagtccaaaatagtgtaactgaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttgacaattactttaattgggcttctgagcatgtgtagtccaaaatagtgtaactgaagg 378
Query: 181 aagacttggattctgagcacacagtgaaacctcttacctctaagataagcctgcatgata 240
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 377 aagacttggattctgagcacacagttaaatctcttacctctaagataagcctgcatgata 318
Query: 241 aggaaactcaagttactgtcattaaccaattacttaataaatatctattagaacagatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aggaaactcaagttactgtcattaaccaattacttaataaatatctattagaacagatac 258
Query: 301 tcactgtaccaaatatttaattcttttttcttccaaattttgataactactttagcacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tcactgtaccaaatatttaattcttttttcttccaaattttgataactactttagcacat 198
Query: 361 gtattctgtgaatatttactaagtagctgctgtgtactacacaaggcactggagatacag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atattctgtgaatatttactaagtagctgctgtgtactacacaaggcactggagatacag 138
Query: 421 caatgaaaaaaatacctactgcaagagaattgatatccttaaagcctatctgaaggtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 caatgaaaaaaatacctactgcaagagaattgatatccttaaagcctatctgaaggtgaa 78
Query: 481 tcatcccagcgcttggg 497
|||||||||||||||||
Sbjct: 77 tcatcccagcgcttggg 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
