MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-425E04
Chromosome	3 (Build37)
Map Location	121,089,566 - 121,089,904
singlet/doublet	singlet
Overlap gene	none
Upstream gene	2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1
Downstream gene	Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726
Link	Open Mouse BAC browser

Click to get alignment info.

name	2510027J23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66568 MGI:1913818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins pseudo : _no_value

name	Tmem56 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99887 MGI:1923195
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668780 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Alg14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66789 MGI:1914039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps3_1234.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435753
definition	note : peptidylprolyl isomerase A pseudogene 3_1234.1 pseudo : _no_value

name	Cnn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71994 MGI:1919244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc44a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213603 MGI:2384860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A730020M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319738 MGI:2442643
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	4930432M17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619318 MGI:3588188
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	F3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14066 MGI:88381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19299 MGI:1349216
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043298 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043298
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Arhgap29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214137 MGI:2443818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abca4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11304 MGI:109424
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668788 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668788 MGI:3643912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	LOC626807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 129 mRNAs, 3998 ESTs, 21 Proteins

name	Gclm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14630 MGI:104995
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps3_1245.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606529
definition	note : peptidylprolyl isomerase A pseudogene 3_1245.1 pseudo : _no_value

name	Dnttip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99480 MGI:1923173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675117 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043726 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	2510027J23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802448 GeneID:66568 MGI:1913818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2510027J23 gene transcript_id : NM_025637.2

name	Tmem56 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130392 GeneID:99887 MGI:1923195
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 56 transcript_id : NM_178936.3

name	Alg14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130268 GeneID:66789 MGI:1914039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 14 homolog (yeast) transcript_id : NM_024178.2

name	Cnn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803177 GeneID:71994 MGI:1919244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calponin 3, acidic transcript_id : NM_028044.2

name	Slc44a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351480 GeneID:213603 MGI:2384860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 44, member 3 transcript_id : NM_145394.2

name	F3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560591 GeneID:14066 MGI:88381
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor III transcript_id : NM_010171.2

name	Abcd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60218876 GeneID:19299 MGI:1349216
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family D (ALD), member 3 transcript_id : NM_008991.2

name	Arhgap29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352258 GeneID:214137 MGI:2443818
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 29 transcript_id : NM_172525.2

name	Abca4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671494 GeneID:11304 MGI:109424
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family A (ABC1), member 4 transcript_id : NM_007378.1

name	LOC100043724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251466 GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 108 mRNAs, 2501 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001481018.1

name	LOC100043724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251464 GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 88 mRNAs, 1993 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001481014.1

name	LOC100043724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251462 GeneID:100043724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 129 mRNAs, 3996 ESTs, 21 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001481013.1

name	Gclm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373116 GeneID:14630 MGI:104995
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate-cysteine ligase , modifier subunit transcript_id : NM_008129.3

name	Dnttip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418930 GeneID:99480 MGI:1923173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deoxynucleotidyltransferase, terminal, interacting protein 2 transcript_id : NM_153806.1

name	LOC675117 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251383 GeneID:675117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to TBP-associated factor 4 transcript_id : XM_001479930.1

name	LOC100043726 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251468 GeneID:100043726
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100043726 transcript_id : XM_001481020.1

name	2510027J23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385102 CCDS:CCDS17799.1 GeneID:66568 MGI:1913818
definition	codon_start : 1 product : hypothetical protein LOC66568 protein_id : NP_079913.1

name	Tmem56 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725869 CCDS:CCDS17800.1 GeneID:99887 MGI:1923195
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 56 protein_id : NP_849267.1

name	Alg14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195608 CCDS:CCDS17801.1 GeneID:66789 MGI:1914039
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : asparagine-linked glycosylation 14 homolog protein_id : NP_077140.1

name	Cnn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312564 CCDS:CCDS17802.1 GeneID:71994 MGI:1919244
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0031032 - actomyosin structure organization and biogenesis [Evidence IEA] codon_start : 1 product : calponin 3, acidic protein_id : NP_082320.1

name	Slc44a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703788 GeneID:213603 MGI:2384860
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : solute carrier family 44, member 3 protein_id : NP_663369.1

name	F3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560592 CCDS:CCDS17805.1 GeneID:14066 MGI:88381
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence TAS] codon_start : 1 exception : mismatches in translation note : tissue factor product : coagulation factor III protein_id : NP_034301.2

name	Abcd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60218877 CCDS:CCDS17806.1 GeneID:19299 MGI:1349216
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005778 - peroxisomal membrane [Evidence IDA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : peroxisomal membrane protein 1; peroxisomal membrane protein, 70 kDa product : ATP-binding cassette, sub-family D, member 3 protein_id : NP_033017.2

name	Arhgap29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563303 CCDS:CCDS17807.1 GeneID:214137 MGI:2443818
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] codon_start : 1 product : PTPL1-associated RhoGAP 1 protein_id : NP_766113.1

name	Abca4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671495 GeneID:11304 MGI:109424
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence TAS]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005548 - phospholipid transporter activity [Evidence IMP]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IMP] GO_process : GO:0006649 - phospholipid transfer to membrane [Evidence IMP]; GO:0045494 - photoreceptor maintenance [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : rim protein; RmP; Rim protein; ATP-binding cassette 10 product : ATP-binding cassette, sub-family A, member 4 protein_id : NP_031404.1

name	LOC100043724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251463 GeneID:100043724
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001481063.1

name	LOC100043724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251465 GeneID:100043724
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001481064.1

name	LOC100043724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251467 GeneID:100043724
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001481068.1

name	Gclm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680019 CCDS:CCDS17808.1 GeneID:14630 MGI:104995
definition	GO_function : GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : glutamate cysteine ligase (gamma-glutamylcysteine synthetase), regulatory product : glutamate-cysteine ligase , modifier subunit protein_id : NP_032155.1

name	Dnttip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418931 CCDS:CCDS17809.1 GeneID:99480 MGI:1923173
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : acidic 82 kDa protein mRNA product : acidic 82 kDa protein protein_id : NP_722501.1

name	LOC675117 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251384 GeneID:675117
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479980.1

name	LOC100043726 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251469 GeneID:100043726
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481070.1

name	LOC668778 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668778
definition	number : 1 pseudo : _no_value

name	LOC668780 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668780
definition	number : 1 pseudo : _no_value

name	LOC668780 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668780
definition	number : 2 pseudo : _no_value

name	LOC100043298 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043298
definition	number : 2 pseudo : _no_value

name	LOC100043298 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043298
definition	number : 1 pseudo : _no_value

name	EG668788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668788
definition	number : 1 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 9 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 8 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 7 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 6 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 5 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 4 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 3 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 2 pseudo : _no_value

name	LOC626807 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626807
definition	number : 1 pseudo : _no_value

name	LOC435752 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251377 GeneID:435752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_034436.1

name	A730020M07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251460 GeneID:319738 MGI:2442643
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA A730020M07 gene transcript_id : XR_035469.1

name	4930432M17Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251461 GeneID:619318 MGI:3588188
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930432M17 gene transcript_id : XR_035470.1

clone name	MSMg01-317I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491P23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-306H04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368D02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-401A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-427L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210E15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-425E04.T7 (MSMg01no425_e04.b1)	MSMg01-425E04.TJ (MSMg01no425_e04.g1)
ACC	AG518985	AG518986
length	1,308	721
length of high quality (start - end)	---	470 (71 - 540)
definition	CHROMAT_FILE: MSMg01no425_e04.b1 PHD_FILE: MSMg01no425_e04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:46:26 2005	CHROMAT_FILE: MSMg01no425_e04.g1 PHD_FILE: MSMg01no425_e04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:46:26 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TGTCATTTGCCCGCCATGCAAACAGACATGGACAACATCTTTCCACAAAA AGCGCGCGAGCGAAAAACTGTCGGTTCTCTTTCCTCCCCCGCCGCAGACG ATACCCCCGAAGATAGCAATTGATTGTCTAGATGATGGAGGCCAGATCTC TTCTGCGACGCAGCTTTGCTCAAATAGCACGAAAAGCAAAACGGATAACA ATGAGAAATATAAAGTACAGAGCCGTATAATACACGACCCCTCTGTTACT AATTCTGAGAATGTACACAAGCACCCTCTAAGTATGACTTTAGGGTGTGA AAAGACGCGCATGCGACTTATAGCGCCGTCTGAGTATAGTACCAGCGTTA TATTTACACAATTGTACACTTGTTTATTAGTATAACACCACCTATACCCT ACGTTACACGTAGTATGTTGTGAGCGCTGCAGAGTATGAGTGGTTGTATG AGCGATCTCCCACGCGCGCAAGATACGGACCGCTCGCTCGGATAGTGCGC CGTCGGCCTTACTGCCAGATCCTATATGGGTTATTTGATTGACGGAACAA ACATAGTGTATGTCGTTCGGACTCCAACGTTATAAACGTCATACAACCGC ATAATTACGCGCACGCGCCGTTTCTCCGCCCTATCTTTTATATATATATC ACGCATCCTCTCCGTATCTGCTCCGCTCGGACATAATACAACGCGCATGC GATCACCGCATAGGTTGTGACATAGAATATGCCGGCAGATTTTCTCATAC TACTTGATCTACTGTTGTGACGATAACGCTAGACACGCTTTAGATCATAT TGCGCGCCGCATGCTTAGTACATAGCTAGTGAGTACACAATCACACTTAT ATATCACGATACATATGATTCAAAGTGTATGCACCAACTTGTGGATATGA TTAGTAGGTGATACGCACCAAATACTACCCGTAGCCATGTGTAATCTCAC CGCAAGAGCGCATATAACGATCGCACACTCAATATGTCGCGACGCTGATC TCTCATCTCTATATNATACTCCTCACGTTGTAATCTATGCGCCACGCACA TCTCACACACGTTCGTACGCTAATTAACACGTGTGATAGTAACAACACGA AATATCCAGTGATCATGTTAGAGATATATACGATATAGCATACAAGTATA GATATCCATAACATACTNGAATCATANGCGCCAACTCTGTGCTATATATC ACATCTCTATATGTTCGAACACCATTGTGTAGCTACATATCNTGCTATAT GATTGGCGACTGACTACGCCATCGGTGCTTNATTCTGCGTCAGCACGCAC ATGCGTCN	GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXCACTGATTAGCATCCAGTCATCTGCATGGA GACAAAGGATCAATGTGCATCAAACAAAACTGGGGTGCGGCGTTTCCTTT AAAATTAGGATTATGGTCCGACAAGATGGCTCAGCGTCAGGCCAGAGGAC CTGAGTTCAATCCCTGGGACCTGCATGACGGAAGAAAATAACTACGTCCT ATGTGTTGTTCTCTGACCGTCGTGTGTGTACAGTGGCATGTACACCTGCA TGCATATACACATACAAATAAATAAATGCTATGATAAAATTTAATTAATT TGAATTATACAAAAAACCAGATGGAAACAAAATAAAATAAAACAAAACAA AACAACCAGATGATTGTCTGACCAAGGGAGGAAATGCTAGACCTCTCATG TTCCTAGTTATTTTTCTTCTACAAGGTAAATATAACTTTAAATCAGCAGT CCTCAAATGTGGGTTATAATCTCTTCGAGGGTCTTAAATCAGACAACCTG CATATCATTTATATTATGAATTGTAACAGAAGCCAAATTACTTATGAAAT AGCTACAACTATAACTTTATGGTTAGAGTTCCACAACATGAGCAACTGCA TTTAAAGGCCCCCCACCTTTTCGTACGGTTGACCAACCCTGTTTTTAATG AAAAAAACGTCTCATGGTTCC
quality values	Open. Hide. 6 6 6 8 8 10 9 7 9 6 8 8 10 8 10 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 10 10 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 11 10 6 6 6 6 6 6 8 8 9 9 12 11 11 10 12 11 11 10 8 8 6 6 10 8 8 8 8 8 8 9 8 8 7 7 8 8 13 10 12 11 6 6 6 8 8 8 9 8 7 6 6 8 6 10 11 9 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 6 6 8 6 6 6 6 6 8 10 8 8 8 8 8 10 8 9 8 8 8 8 10 8 8 8 8 8 8 8 8 10 10 11 7 9 7 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 10 10 10 9 9 7 8 8 8 8 8 8 8 6 6 8 8 8 10 10 10 9 9 9 8 8 7 7 8 8 6 7 6 6 8 8 8 8 10 11 8 8 8 6 6 6 6 8 8 14 11 8 8 6 6 6 6 8 10 11 8 8 8 8 8 8 8 10 8 8 8 8 9 10 9 9 9 8 10 8 8 8 8 6 6 6 6 10 10 8 8 8 8 8 8 10 10 10 10 10 10 8 8 8 6 6 6 6 8 8 10 10 10 8 8 8 8 8 8 9 9 11 12 13 12 12 11 11 10 10 10 10 10 11 9 9 8 8 8 8 8 8 8 8 8 10 10 10 10 10 9 6 8 6 7 10 11 7 7 8 8 8 8 8 8 8 8 7 7 6 6 8 8 8 8 8 8 6 6 6 6 11 12 11 10 9 10 10 9 9 9 8 10 8 8 8 8 8 6 6 8 8 9 8 8 7 7 6 6 8 8 10 8 8 8 8 8 8 17 17 10 9 8 8 6 6 8 6 6 8 8 7 6 7 8 6 9 9 8 8 6 6 6 6 8 8 6 6 8 8 9 9 9 9 8 8 6 6 6 6 6 8 8 6 8 8 8 8 8 8 8 9 10 9 11 9 9 8 6 6 6 8 8 8 8 6 6 8 8 11 11 11 10 10 8 8 10 8 10 10 8 8 8 8 8 8 12 12 13 10 8 8 7 6 8 8 8 7 9 9 9 10 6 8 7 7 9 11 11 9 8 8 8 8 8 8 11 10 8 8 8 6 6 10 8 6 6 8 8 9 9 9 8 8 6 6 6 10 8 8 8 8 6 6 6 6 8 10 10 8 6 8 6 6 6 6 8 8 10 10 8 8 8 8 8 10 10 10 10 10 10 10 9 9 10 10 9 8 8 8 7 7 7 8 10 8 8 8 8 8 12 12 12 11 12 8 6 6 6 6 10 12 13 10 8 8 15 8 10 8 8 8 8 8 8 8 8 8 10 12 12 8 8 6 6 6 6 6 7 12 10 8 8 8 8 10 7 6 6 8 8 8 8 8 8 6 6 8 6 7 8 6 8 10 10 9 8 10 8 8 8 8 9 8 10 8 8 8 8 8 8 6 6 6 8 8 6 6 8 6 8 8 8 8 10 11 8 8 8 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 6 6 6 6 6 6 7 9 9 9 10 8 8 8 9 9 8 8 8 6 8 7 7 6 6 8 8 8 8 8 8 6 6 6 6 6 8 6 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 6 6 6 6 6 6 8 8 8 10 12 10 10 10 14 13 12 10 8 8 8 8 8 8 8 8 8 10 10 6 6 6 6 6 8 8 12 11 8 8 13 8 8 8 13 10 11 11 11 14 8 8 6 6 6 6 8 8 11 8 9 8 8 8 8 8 8 6 6 6 6 6 8 13 10 10 9 8 8 8 8 8 8 8 8 8 6 8 6 6 8 8 10 10 8 8 8 10 10 10 9 9 9 6 8 6 6 6 6 8 8 10 9 9 10 8 8 8 8 8 10 11 11 11 8 10 8 10 10 10 10 9 8 8 10 10 10 8 9 10 10 13 10 9 7 8 8 8 8 8 8 8 8 8 8 6 8 6 6 10 6 6 6 6 8 10 8 8 12 11 11 11 11 8 8 8 8 8 10 8 8 8 8 8 8 10 10 10 10 8 8 6 6 8 8 8 9 8 6 6 6 6 6 15 14 14 14 13 12 10 9 10 10 10 9 9 10 11 10 10 8 11 8 8 8 8 8 8 8 6 8 8 8 8 8 10 6 6 3 0 3 10 9 10 8 8 6 6 8 6 10 9 8 10 6 6 6 7 8 8 8 10 9 6 6 6 6 8 8 8 8 9 8 10 8 8 8 10 10 16 11 11 10 6 8 6 6 6 6 8 8 8 8 10 8 6 6 6 6 7 9 8 9 10 15 8 8 6 6 6 6 6 6 6 8 8 8 8 8 9 11 6 6 6 6 6 6 9 9 9 10 8 8 8 8 10 8 8 8 9 9 9 10 8 8 8 8 8 8 8 8 10 10 9 9 9 9 10 10 13 12 8 6 6 6 8 8 6 6 6 6 6 8 8 11 8 8 8 8 8 8 8 10 10 8 8 10 9 10 13 8 3 0 3 9 10 10 8 8 8 3 0 3 6 6 6 6 6 8 8 9 9 7 9 9 13 9 9 10 8 8 8 8 8 8 10 9 9 9 9 9 8 7 7 7 8 9 12 6 6 6 6 6 6 13 12 8 6 6 6 6 6 6 8 6 6 6 6 8 8 10 8 8 8 10 3 0 3 6 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 9 6 6 6 6 6 6 10 10 10 9 9 9 8 6 6 6 6 3 0 3 7 7 8 6 6 6 8 6 6 6 6 8 6 6 6 8 9 6 6 6 6 6 8 8 3 0	Open. Hide. 10 10 9 9 15 10 11 9 18 22 37 41 59 50 50 47 47 44 44 44 39 39 44 27 27 18 9 9 7 8 8 8 8 8 8 16 15 18 23 13 15 28 30 33 36 36 33 33 33 50 42 41 25 22 9 9 7 8 8 11 11 11 12 18 13 22 29 29 31 31 31 36 30 36 47 53 53 53 53 53 53 53 53 53 53 53 57 57 59 57 57 57 53 50 68 68 47 47 68 68 51 50 68 68 68 68 50 50 50 41 41 41 50 57 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 50 50 50 50 50 50 48 48 46 46 46 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 52 57 52 57 57 59 59 59 59 59 59 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 68 68 59 59 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 44 43 38 18 12 12 15 16 29 20 27 43 44 62 62 62 62 62 68 68 62 62 68 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 57 57 57 57 57 57 59 59 57 57 52 52 52 57 57 57 57 57 52 57 52 52 52 57 57 57 43 52 57 57 57 52 52 57 57 57 52 52 57 57 57 57 57 57 59 52 43 43 38 41 35 43 43 57 57 52 52 52 52 52 54 57 57 52 52 52 52 52 52 54 52 52 52 52 52 57 57 57 57 57 59 59 68 68 68 68 59 59 43 39 39 59 59 59 54 57 57 59 44 57 57 44 44 44 57 59 59 59 57 57 57 48 42 42 31 31 22 32 13 13 13 34 34 59 57 59 48 48 48 48 44 48 68 48 43 36 33 32 32 33 33 32 35 35 39 37 37 32 43 40 40 30 30 30 37 37 32 32 23 23 19 21 10 12 19 26 25 40 39 39 43 41 32 32 30 33 32 28 15 14 16 17 10 10 11 16 12 8 8 8 8 10 11 14 19 19 21 24 22 22 22 31 34 36 36 36 33 24 21 21 21 20 25 15 17 9 9 8 8 11 13 12 16 12 10 10 9 9 8 8 10 10 10 10 10 12 15 10 10 9 9 10 8 8 8 8 8 8 6 6 6 6 8 8 14 11 11 9 12 13 12 11 7 7 6 6 8 10 17 24 17 17 11 11 9 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 10 10 13 8 8 6 7 9 15 30 13 13 9 9 8 8 8 8 11 16 14 9 8 8 8 10 10 10 11 11 11 11 13 10 8 8 8 8 8 8 10 8 8 8 8 8 10 12 15 11 11 11 12 11 11 10 9 9 9 9 9 10 10 10 10 9 9 10 10 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no425_e04.g1 MSMg01no425_e04.g1 CHROMAT_FILE:
MSMg01no425_e04.g1 PHD_FILE: MSMg01no425_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:26 2005
         (470 letters)



>mm_chr3_121089031_121089904
          Length = 874

 Score =  584 bits (302), Expect = e-171
 Identities = 330/344 (95%), Gaps = 9/344 (2%)
 Strand = Plus / Minus

                                                                       
Query: 131 ctgagttcaatccctgggacctgcatgacggaagaaaataactacgtcctatgtgttgtt 190
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 874 ctgagttcaatccctgggacctgcatgacagaagaaaataactacgtcctatgtgttgtt 815

                                                                       
Query: 191 ctctgaccgtcgtgtgtgtacagtggcatgtacacctgcatgcatatacacatacaaata 250
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 ctctgaccgtcgtatgtgtacagtggcatgtacacctgcatgcatatacacatacaaata 755

                                                                       
Query: 251 aataaatgctatgataaaatttaattaatttgaattatacaaaaaaccagatggaaacaa 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 aataaatgctatgataaaatttaattaatttgaattatacaaaaaaccagatggaaacaa 695

                                                                       
Query: 311 aataaaataaaacaaaacaaaacaaccagatgattgtctgaccaagggaggaaatgctag 370
           | |||||     |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 694 agtaaaa-----caaaacaaaacaaccagaagattgtctgaccaagggaggaaatgctag 640

                                                                       
Query: 371 acctctcatgttcctagttatttttcttctacaaggtaaata----taactttaaatcag 426
           || |||||||||||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 639 acttctcatgttcctagttatttttcttctacaaggtaaataaatataactttaaatcag 580

                                                       
Query: 427 cagtcctcaaatgtgggttataatctcttcgagggtcttaaatc 470
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cagtcctcaaatgtgggttataatctcttcgagggtcttaaatc 536


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 874
Length adjustment: 10
Effective length of query: 460
Effective length of database: 864
Effective search space:   397440
Effective search space used:   397440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information