XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGATGCGCGGAATTCTG
AAAATTACGCTAAAATGCTGCTGAAGGTACAAACTTGCTACCAAGGTGAG
GGAAAGCAAGGCAAAAAGCAAAAACTTCCTTCTTCCATGTCCTTATACAG
GCTTCCAGCAGAAGGTCTGGCCCAGATTACAGGTGTGTCTTCCCACATCA
AGATCCTCTTCTGGTGTGTCTGAAGAGAGCAGTGGTGATGCACTCATTTG
CATAAAATAAATAAATTTAAAAAAAAAGAAAGACACATTTTTTTCTCCTA
CTGTGCGAGGTTCCTTATTAAACCTAGAATCCCCATTCTGAGGGCCATAT
CAATACACTCAGCCTTACCCAGTTTTATGTTCCTGCCACCATTATCCCAT
ACTTTTAGCATTCATTCCAACACATATTCTCCATATGTGCTTGAATGAAT
GAGCCAACTCATTAAGATCTTTAGTGTTACTGTGTACCACCTCATGAACT
ACACTTCCTACCTCTTCTCAAGGAGCCACTTGTGCATTAAGTCTGGTTAT
AGGTCTAGAGACAACAATTGGGAGGTCCTGAGGGACATCAATATTTTCTT
GCCTATCATTTCTTTCAAAGGTCACTGTTGGTTTAGCAGACCATGAAATA
TTAATTTCCTCAGCCTTACGTAGAAAGACACTATTTCATAGGGGAGTGAG
GTGAGAACTCTTCCAATGAGGTACTTCCTC

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGTCATGGGAAAGCTGAAGGCAGGATACCAA
CGACTGCCCATATTTCTTTTAGGAATAATATAAACAGAAAATAAAATTAT
TTTCTATACTTCCCAATCAGTTTACAGAATTTTGTTATGTCTTAATTGGA
AAACTACTGACAATCCTAATAAAAACTTAGATAGGCTGTATCAATTATAT
ATTTCTGAAATAGTGTTAGGTGAATGTTTTTAAGGTCCTGCAATGTTAAG
ATTAGAGGCTCATTTTATAATATTTGAAAAATACAGAATGCTATAATGAA
GCTATTAGTAATCCATAATTTCATATACATATATGTATATATATATATTC
AATACTTCTGCTTTCATCTGTGTATATATAACATAATTTAAATATTTTTA
TTGAGTCATATCAAAGAAATCTAGTTTTGCTACCAACTGCAACATGACTA
TAGGCTGGTTATTGAAGCTTTCTGGCTTCAGTTTCAGTTGAAAATTTAGA
TAATTTGCAAAGGATTATAGGTTAAGTTCATTTCAATTCTACTAATACTT
TTCTGTTCAGTTTGCTCTACAGAAAATGAACTGATTACCCCCTATTTGCA
GGTACTGTTGCACCTGACAGAAAGATAGAAATATATGTTGAAGGCGATGG
AATTTTCCTCCCACATTAATTTTTGTTTTGAAAAAAAAAAACCTTATTCC

Query= MSMg01no425_h07.g1 MSMg01no425_h07.g1 CHROMAT_FILE:
MSMg01no425_h07.g1 PHD_FILE: MSMg01no425_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:41 2005
         (480 letters)



>mm_chr3_19873745_19874624
          Length = 880

 Score =  899 bits (465), Expect = 0.0
 Identities = 477/483 (98%), Gaps = 5/483 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtcatgggaaagctgaaggcaggataccaacgactgcccatatttcttttaggaataat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcatgggaaagctgaaggcaggataccaacgactgcccatatttcttttaggaataat 260

                                                                       
Query: 61  ataaacagaaaataaaattattttctatacttcccaatcagtttacagaattttgttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaacagaaaataaaattattttctatacttcccaatcagtttacagaattttgttatg 320

                                                                       
Query: 121 tcttaattggaaaactactgacaatcctaataaaaacttagataggctgtatcaattata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttaattggaaaactactgacaatcctaataaaaacttagataggctgtatcaattata 380

                                                                       
Query: 181 tatttctgaaatagtgttaggtgaatgtttttaaggtcctgcaatgttaagattagaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttctgaaatagtgttaggtgaatgtttttaaggtcctgcaatgttaagattagaggc 440

                                                                       
Query: 241 tcattttataatatttgaaaaatacagaatgctataatgaagctattagtaatccataat 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcattttagaatatttgaaaaatacagaatgctataatgaagctattagtaatccataat 500

                                                                       
Query: 301 ttcatatacatatatgtatatatatatattcaatacttctgctttcatctgtgtatatat 360
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 501 ttcatatacatatatgtatatatatat--tcaatacttctgctttcatctgtgtatatat 558

                                                                       
Query: 361 aacataatttaaatatttttattgagtcatatcaaagaaatct---agttttgctaccaa 417
           |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||
Sbjct: 559 aacataatttaaatatttttattgagtcatatcaaagaaatctcctagttttgctaccaa 618

                                                                       
Query: 418 ctgcaacatgactataggctggttattgaagctttctggcttcagtttcagttgaaaatt 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctgcaacatgactataggctggttattgaagctttctggcttcagtttcagttgaaaatt 678

              
Query: 478 tag 480
           |||
Sbjct: 679 tag 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)