Query= MSMg01no425_j10.b1 MSMg01no425_j10.b1 CHROMAT_FILE:
MSMg01no425_j10.b1 PHD_FILE: MSMg01no425_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:51 2005
(388 letters)
>mm_chr3_115282705_115283492
Length = 788
Score = 652 bits (337), Expect = 0.0
Identities = 376/393 (95%), Gaps = 10/393 (2%)
Strand = Plus / Minus
Query: 1 ttagacccaaatcagtaacaggttggaaggcattagctgggcataacaaagcattacttg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 588 ttagacccaaatcagtaacaggttgggaggcattagctgggcataacaaagcattacttg 529
Query: 61 tatatgtgggtgggtctggcagctcagctggtcctaggatgtaaatgagctgcaagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tatatgtgggtgggtctggcagctcagctggtcctaggatgtaaatgagctgcaagcaag 469
Query: 121 ccaatccccagaatgcagagtctttagttgctgctgctccatcctcatgaatctaggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ccaatccccagaatgcagagtctttagttgctgctgctccatcctcatgaatctaggctc 409
Query: 181 ccagaacttgaatataaaatgccaattctaagaaagctgtctgaccccagcttatgaagc 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ccagaacttgaatacaaaatgccaattctaagaaagctgtctgaccccagcttatgaagc 349
Query: 241 aacgcacg----tttttgtgtgtgttcaatactttgtcgagccaccttttcaaagttgat 296
||| |||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 348 aacacacggaact----gtgtgtgttcaatattttgtcgagccaccttttcaaagttgat 293
Query: 297 tttcagacaatatttacttgtgattcttctcacctccactgggaattttacgctacgaag 356
|||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 292 tttcagacaatatttacttgtgattcttctcacctccactgggaattttaggttaggaag 233
Query: 357 agcagtatatttcttc-tggtgtctcactggga 388
|||||||||||||| | ||||||||||||||||
Sbjct: 232 agcagtatatttct-catggtgtctcactggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_j10.g1 MSMg01no425_j10.g1 CHROMAT_FILE:
MSMg01no425_j10.g1 PHD_FILE: MSMg01no425_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:51 2005
(324 letters)
>mm_chr3_115084038_115084763
Length = 726
Score = 557 bits (288), Expect = e-163
Identities = 316/326 (96%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 1 cccacttgggcccaaaacaaccccagacttcatactttccagccaaaaagcaggaactat 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccacttgggcccaaaacaactccagacttcatactttccagccaaaaagcaggaactat 260
Query: 61 aactcaatagtatctttcttttgtgacttgctgatgttcatggtctgtctacgatgagaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactcagtagtatctttcttttgtgacttgctgatgttcatggtctgtctacgatgagaa 320
Query: 121 ctctttgtcaatgccttctatgaagtctggccaggctctacttctgcccttgtatttacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctttgtcaatgccttctatgaagtctggccaggctctacttctgcccttgtatttacc 380
Query: 181 acctctgggagctggaccagaatggaaggaaggaagcttaaccatat--gggtgggttca 238
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 381 acctctgggagctggaccagaatggaaggaaggaagcttgaccatatatgggtgggttca 440
Query: 239 caggaactcgtttgttttgagtgtggatgtgggtgagtcttctccaagattgttttcatt 298
|||||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 441 caggaactcggtagttttgagtgtggatgtgggcgagtcttctccaagaaagttttcatt 500
Query: 299 gttacagccttctttattgtgagtaa 324
||||||||||||||||||||||||||
Sbjct: 501 gttacagccttctttattgtgagtaa 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 726
Length adjustment: 9
Effective length of query: 315
Effective length of database: 717
Effective search space: 225855
Effective search space used: 225855
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
