XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTAAT
TATACCCAGAATTATCTGTAAGTTAAGAATTTCAATAAATTACTGTTTAT
TCTTATTAATAAAAAGCAACATTACGCTGGGCATGGTGGCACATGCCTTT
AATCCCAGCACTCGGAGGCAGAAGCAGGCAAATTTCTGAGTTCGAGGCCA
GCCTGGTCTACTAAGTGAGCTCCAGGACAGTCAGAGCTATACAGAGAAAA
CCTGTCTTGAAAAACCAACAACAACAAAATAGCAACATTACAAAAATTTT
TTTAAAAAAGCTTTATTACAAAGTATTTAAGTGAATTATCCTTCTATTTT
AATTTTTGAATATGTTATCAATACTGGGTGCCTGATATAAATACAATTTT
CTGAAACTTATCTAAGAAGTCATCCATATATTTATTCTGAAGTGATTTAT
GTAAAATTCATTTTTATTATTTCCATGCCTTTGGAGTGAATCATTTTGTT
TTTCCTCAAAATTCCCTTGGAACACAATCAATATTTTATCACCGGAAACA
GAACTGTGTTTACCTTGACACAGAATTCAAGTTCTATCCCTTCTTCTTCA
TCAAAATGTAGAAATCTGTCAACCCATCAGTCATATTGACCACATCCCTA
AAGATCAAGTAGATCTGTTGGTCTTGACTCACCAAGTGATTCCCCCACCC
CCCAAGCCTGTGCTTATTTCCTACAATAACCCCTTTTCTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTTGAAGCTTTAACTGCCTCTTTTGGTTGTGCACAA
TTAGAATCACTCTTTGTGATGTACAGTTGCTTGGGTGTTGACAGAATCAC
AATATGGAATATTCGCCAGGGCCTGCTACAGAGTAGCTATACCATTCAGA
GTAGTTGCAACCAACTCCTTGGCTGACTTCAAATGTACTGTCTTTCCCAC
TTCTAAAACTCTAAATTGGTTACTATTTCTATGGTTTTGTCCTTGGAGAA
TGTCAGGTCAGTGGAATAATTTAGAAAATACAAAATATATAGTTGCTTTT
ACAGATAACCTTCTTTTGCTGAGACATTTGCCTTAAAGTCATTCAAATAT
TTACATGGCTCTGTAGCACTTTCTTTCAGTTAGCAAAAATCATCCCCCCG
AATGAAGGTGATGAAGTTTATTTTTCTGTTTGCTTGTTAGAAGCTAAAGT
GCTAACAATATTCACATGCAATATTGTGTCTGTGTGTATGTATGTGTGTA
AACAAGGATTCACATCACTTAAAAATATGAAGGGACTCCATTATTACTCA
GATGACAACCTTATTTAGCTGTATCCCACCCCCTGGACCTAATTTTCCCT
ACCTTTTGCAGGCCTTTGAAAAAATAAAGTTTCTGGGGGTTTTTTTCCTT
TTTCACCGGAAGAATATTTTAATTTAATAAATTGAGGCCCTTTAAAAAGG
GGGAGGGCCCGTTT

Query= MSMg01no425_m15.b1 MSMg01no425_m15.b1 CHROMAT_FILE:
MSMg01no425_m15.b1 PHD_FILE: MSMg01no425_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:06 2005
         (604 letters)



>mm_chr3_44603830_44604833
          Length = 1004

 Score = 1110 bits (574), Expect = 0.0
 Identities = 592/598 (98%), Gaps = 1/598 (0%)
 Strand = Plus / Minus

                                                                        
Query: 8    aagttaagaatttcaataaattactgtttattcttattaataaaaagcaacattacgctg 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 aagttaagaatttcaataaattactgtttattcttattaataaaaagcaacattacgctg 945

                                                                        
Query: 68   ggcatggtggcacatgcctttaatcccagcactc-ggaggcagaagcaggcaaatttctg 126
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 944  ggcatggtggcacatgcctttaatcccagcactcgggaggcagaagcaggcaaatttctg 885

                                                                        
Query: 127  agttcgaggccagcctggtctactaagtgagctccaggacagtcagagctatacagagaa 186
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 884  agttcgaggccagcctggtctactaagtgagctccacgacagtcagagctatacagagaa 825

                                                                        
Query: 187  aacctgtcttgaaaaaccaacaacaacaaaatagcaacattacaaaaatttttttaaaaa 246
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824  aacctgtcttgaaaaaccaacaacaacaaaatagcaacattacaaaaatttttttaaaaa 765

                                                                        
Query: 247  agctttattacaaagtatttaagtgaattatccttctattttaatttttgaatatgttat 306
            |||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 764  agcaacattacaaagtatttaagtgaattatcattctattttaatttttgaatatgttat 705

                                                                        
Query: 307  caatactgggtgcctgatataaatacaattttctgaaacttatctaagaagtcatccata 366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704  caatactgggtgcctgatataaatacaattttctgaaacttatctaagaagtcatccata 645

                                                                        
Query: 367  tatttattctgaagtgatttatgtaaaattcatttttattatttccatgcctttggagtg 426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644  tatttattctgaagtgatttatgtaaaattcatttttattatttccatgcctttggagtg 585

                                                                        
Query: 427  aatcattttgtttttcctcaaaattcccttggaacacaatcaatattttatcaccggaaa 486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584  aatcattttgtttttcctcaaaattcccttggaacacaatcaatattttatcaccggaaa 525

                                                                        
Query: 487  cagaactgtgtttaccttgacacagaattcaagttctatcccttcttcttcatcaaaatg 546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524  cagaactgtgtttaccttgacacagaattcaagttctatcccttcttcttcatcaaaatg 465

                                                                      
Query: 547  tagaaatctgtcaacccatcagtcatattgaccacatccctaaagatcaagtagatct 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464  tagaaatctgtcaacccatcagtcatattgaccacatccctaaagatcaagtagatct 407


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)