Query= MSMg01no425_p13.b1 MSMg01no425_p13.b1 CHROMAT_FILE:
MSMg01no425_p13.b1 PHD_FILE: MSMg01no425_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:20 2005
(518 letters)
>mm_chr3_88352507_88353424
Length = 918
Score = 955 bits (494), Expect = 0.0
Identities = 512/518 (98%), Gaps = 1/518 (0%)
Strand = Plus / Minus
Query: 1 gcctccaactcagaaatccgtctgcctctgcctcccaagtgctgggattaaaggtatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gcctccaactcagaaatccgtctgcctctgcctcccaagtgctgggattaaaggtatgtg 828
Query: 61 ccactacacccgtgtgaaaaaattgtttaggttattttatgtacatgagtgttttgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ccactacacccgtgtgaaaaaattgtttaggttattttatgtacatgagtgttttgactg 768
Query: 121 tttgtgtgtctgcacttgtgcctgtaaagggcatcagatatccctgaaaccagagttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tttgtgtgtctgcacttgtgcctgtaaagggcatcagatatccctgaaaccagagttagc 708
Query: 181 aggtggctgtgagagagctatgctgagaacctaaccagggtcttctgcaagagcagcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aggtggctgtgagagagctatgctgagaacctaaccagggtcttctgcaagagcagcggt 648
Query: 241 gcccttattttctgtatctcactcaaccctcagagcagaatctcacccgcccgttttgca 300
||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gcccttagctgctg-agctcactcaaccctcagagcagaatctcacccgcccgttttgca 589
Query: 301 gcacctgggactgatctaaaggagcaaatgcctgttcttgctggacacagaaaatagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gcacctgggactgatctaaaggagcaaatgcctgttcttgctggacacagaaaatagagg 529
Query: 361 tcaccctttctagtttaaggagtgctcctgctcctttccctaccttttcatgatcctctc 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tcaccctttctaatttaaggagtgctcctgctcctttccctaccttttcatgatcctctc 469
Query: 421 tgcagcatttgttttaatttaaaaaaaaaaaaatcgtgtgtgagcacagcagactcctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tgcagcatttgttttaatttaaaaaaaaaaaaatcgtgtgtgagcacagcagactcctct 409
Query: 481 gcattgcctttacttatttactgtttgcgtacatgacg 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcattgcctttacttatttactgtttgcgtacatgacg 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_p13.g1 MSMg01no425_p13.g1 CHROMAT_FILE:
MSMg01no425_p13.g1 PHD_FILE: MSMg01no425_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:20 2005
(477 letters)
>mm_chr3_88153518_88154394
Length = 877
Score = 907 bits (469), Expect = 0.0
Identities = 475/477 (99%)
Strand = Plus / Plus
Query: 1 acagagatctgcctgcctcttcctcattagtgctgggattaaaggtgtgcgccagcctac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 acagagatctgcctgcctcttcctcactagtgctgggattaaaggtgtgcgccagcctac 260
Query: 61 acaacagattgattggttgattgattgatttgatgtgctgaaggttgaacccatggccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacagattgattggttgattgattgatttgatgtgctgaaggttgaacccatggccgt 320
Query: 121 atgcatgcttggcaaacacgttacacttgaattgtgttcatagttctttaccagctccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcatgcttggcaaacacgttacacttgaattgtgttcatagttctttaccagctccag 380
Query: 181 cccatcactgacgtcccgtgtccctcctgcctttccgtagctccgtggactcagaactga 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccatcactgacgtcccgtatccctcctgcctttccgtagctccgtggactcagaactga 440
Query: 241 cctcactctgccagtcagtcctagaggatttcaacctctgcctcttctacctgccctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcactctgccagtcagtcctagaggatttcaacctctgcctcttctacctgccctcct 500
Query: 301 cacccaaccttggtctaaccaacgaggatgaggaggagtgtgaaagtggatatgctttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacccaaccttggtctaaccaacgaggatgaggaggagtgtgaaagtggatatgctttcc 560
Query: 361 tccccgacctgctcatctttcagatggccatcatctgcctcatgggtgtgcacagtttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccccgacctgctcatctttcagatggccatcatctgcctcatgggtgtgcacagtttaa 620
Query: 421 agagagcaggtaccccttaccatgaccctttgctccccactgtcctgcttgcagtgt 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagagcaggtaccccttaccatgaccctttgctccccactgtcctgcttgcagtgt 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
