Query= MSMg01no426_c08.b1 MSMg01no426_c08.b1 CHROMAT_FILE:
MSMg01no426_c08.b1 PHD_FILE: MSMg01no426_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:34 2005
(424 letters)
>mm_chr3_82597628_82598451
Length = 824
Score = 654 bits (338), Expect = 0.0
Identities = 392/424 (92%), Gaps = 23/424 (5%)
Strand = Plus / Minus
Query: 1 gctgatttgaaacttggcctgtgtttctgtgtatgtgttgttccgtgcaactctttttga 60
|||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 416 gctgatttgaaacttggcctgtgtttctatgtatgtgttgttccatgcaagtctttttga 357
Query: 61 agaacacatttaacttgctcaaaaagagacattcaacctggatcttgataattataaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agaacacatttaacttgctcaaaaagagacattcaacctggatcttgataattataaact 297
Query: 121 gacctcatcagttaggaagtccaagcataaagtctgcttggacttgtaatatgagatgtg 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 296 gacctcatcagttaggaagtccaagcataaagtcttcttggacttgtaatatgagatgtg 237
Query: 181 agtcccaattactgctgctttaaactacattgccaagaatgtaagggtgatctagctgca 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 236 agtcccaattactgttgctttaaactacattgccaagaatgtaagggtgatctagccgca 177
Query: 241 acatctgtcattccattgaccactagggtgactcagctgacttagctggctatcttcttc 300
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 176 acatctgtcattcccttgaccactagggtgactcagctgacctagctggctatcttcttc 117
Query: 301 cttccccaccattccatgtacttccctcccaaagctgtgctctaggtcaaagaggataac 360
|||||||| ||| |||||| |||||||||||||||||||
Sbjct: 116 cttcccca----------------------aaa-ctgtgccctaggtcaaagaggataac 80
Query: 361 cttcctcaaataaaggagaactgtccttctgtcaagagtctatgagtagctgtgtttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cttcctcaaataaaggagaactgtccttctgtcaagagtctatgagtagctgtgtttttc 20
Query: 421 tgtt 424
||||
Sbjct: 19 tgtt 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_c08.g1 MSMg01no426_c08.g1 CHROMAT_FILE:
MSMg01no426_c08.g1 PHD_FILE: MSMg01no426_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:34 2005
(463 letters)
>mm_chr3_82377476_82378338
Length = 863
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%)
Strand = Plus / Plus
Query: 1 ttttgccatgatttgtgatctttgaaacacaaaacattactaagtgttcaaacgttcttc 60
|||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 201 ttttgccatgatttatgatctttgaaacacaaaacattgctaagtgttgaaacgttcttc 260
Query: 61 tagtgctcaccaggttgatgagctctgttgggcagttcttgatgattctaaaatggattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtgctcaccaggttgatgagctctgttgggcagttcttgatgattctaaaatggattg 320
Query: 121 ctacaaaacagtatattaatgtgtctaggatatatttcatctgtagaaaacagttgtttt 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacaaagcagtatattaatgtgtctaggatatatttcatctgtagaaaacagttgtttt 380
Query: 181 atagcatttcttgttcccttaacaaggtgtactaaattatttgtttcatcttctttacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 atagcatttcttgttcccttaacaaggtgtactaaattatttgtttcatcttctttataa 440
Query: 241 gttttctaaatactgtctgttccttgggtctccatgttatactggctgtactgttcttaa 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttttctaaatactggctgttccttgggtctccatgttatactggctgtactgttcttaa 500
Query: 301 ttgtccaaagcgtattccactcactttatatatttaaaaaatcatatttttatgatagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtccaaagcgtattccactcactttatatatttaaaaaatcatatttttatgatagat 560
Query: 361 gcaattactatagaatattctattgaaaatattagaattcacatttaacaaatagataca 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctattactatagaatattctattgaaaatattagaattcacatttaacaaatagataca 620
Query: 421 ggttattagtcactatatatgtgtgtataattatatacatata 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttattagtcactatatatgtgtgtataattatatacatata 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
