Query= MSMg01no426_d24.b1 MSMg01no426_d24.b1 CHROMAT_FILE:
MSMg01no426_d24.b1 PHD_FILE: MSMg01no426_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:43 2005
(506 letters)
>mm_chr3_90051921_90052825
Length = 905
Score = 903 bits (467), Expect = 0.0
Identities = 491/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccgacgcgttcccggaaccgagcgacagcaatggagtgagaccctcgggaggt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccgacgcgaggccggaaccgagcgacagcaatggagtgagaccctcgggaggt 263
Query: 64 gagtgaggcctcgctggtcgcagggtcaaaggcagcttctgaggcctcccaggctaggag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagtgaggcctcgctggtcgcagggtcaaaggcagcttctgaggcctcccaggctaggag 323
Query: 124 ctggggtctccgtgttaacattttctctgcttcctgcgacgctggcggcctccgacctgg 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctggggtctccgtgttaacatttcctctgcttcctgcgacgctggcggcctccgacctgg 383
Query: 184 tctccgagacttccagacgccgcccagtgcgggctaagctcgtcccaagcccctctttgg 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 384 tctccgagacttccagacgccgcccagtgcgggcaaagctcgtcccaagcccctctttgg 443
Query: 244 ctatatgccgagactacctgttatttccgggaaatggtcctggggagtgggtagttaaga 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 ctatatgccgagactacctgttatttccgggaaatggccctggggagtgggtagttaaga 503
Query: 304 gagtcagccagccccgaagttcgccctgtttcaaatcatcggtgaagccatccgggactt 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagtcagccagccccgaagttc-ccctgtttcaaatcatcggtgaagccatccgggactt 562
Query: 364 ctcttcagctccaacctccctttgctatatgcacttagcagactgagagagtggtctgcc 423
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 563 ctcttcagctccaacctccctttgctacatgcacttagcagactgagagagtggtctgcc 622
Query: 424 ttccttagggaaccccagctccaggtgcaggtcctacctggagtctgcacctcattttct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttccttagggaaccccagctccaggtgcaggtcctacctggagtctgcacctcattttct 682
Query: 484 gcgtgctccaggtgaaaga 502
|||||||||||||||||||
Sbjct: 683 gcgtgctccaggtgaaaga 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_d24.g1 MSMg01no426_d24.g1 CHROMAT_FILE:
MSMg01no426_d24.g1 PHD_FILE: MSMg01no426_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:43 2005
(460 letters)
>mm_chr3_90224660_90225518
Length = 859
Score = 866 bits (448), Expect = 0.0
Identities = 457/460 (99%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 1 attagtctctggctagagtcatttctgtacccagatactaaagctaaaaggcaagaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 attagtctctggctagagtcatttctgtacccagatactaaagctaaaaggcaagaaaaa 600
Query: 61 gcagttgggagaaaaagaaaacacatgactgttaaagtttcaggtctaagactacgaagg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gcagtt-ggagaaaaagaaaacacatgactgttaaagtttcaggtctaagactacgaagg 541
Query: 121 tcaaaattggcatttatttggggtatggaggagatggaggacaaccaagcccacaggagc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 540 tcaaaattggcatttatttggggtatggaggagatgggggacaaccaagcccacaggagc 481
Query: 181 tctcatccaaagaaagaggacctgtagtctgtggcttctgctttgacaaaggaacagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tctcatccaaagaaagaggacctgtagtctgtggcttctgctttgacaaaggaacagaaa 421
Query: 241 acaggcttaaaatggtatcatgtaacctttagagtaaatgacttaatgtaataattaaga 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 acaggcttaaaatggtagcatgtaacctttagagtaaatgacttaatgtaataattaaga 361
Query: 301 agactccggacaacagtggagcctggcttcctagagtattgccaagaatcagcctggcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agactccggacaacagtggagcctggcttcctagagtattgccaagaatcagcctggcgt 301
Query: 361 tttggtaaacagaagagactccagtgcagaaggctcagggccaggcgggatactttcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tttggtaaacagaagagactccagtgcagaaggctcagggccaggcgggatactttcagc 241
Query: 421 gtctgttctctttgtaaaactaagtcttcgtttgttcaga 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtctgttctctttgtaaaactaagtcttcgtttgttcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 859
Length adjustment: 10
Effective length of query: 450
Effective length of database: 849
Effective search space: 382050
Effective search space used: 382050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
