Query= MSMg01no426_k02.b1 MSMg01no426_k02.b1 CHROMAT_FILE:
MSMg01no426_k02.b1 PHD_FILE: MSMg01no426_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:14 2005
(445 letters)
>mm_chr3_67811150_67811994
Length = 845
Score = 630 bits (326), Expect = 0.0
Identities = 401/454 (88%), Gaps = 44/454 (9%)
Strand = Plus / Plus
Query: 6 ggaattcttgatagatttccgaaaagggcccaggctattcctcaaagacatcatgaaagt 65
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcttgatagatgacagaaaagggcccaggctattcctcaaagacatcatgaaagt 265
Query: 66 ggctgtactatactcagcctaaattgtcctactgatgccttgggcttctaagcagctcta 125
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggctgtactacactcagcctaaattgtcctactgatgccttgggcttctaagcagctcta 325
Query: 126 ccctttctttttgtcagaaagggccttggctcctgtgcctgacggttcccaaagtgtcct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccctttctttttgtcagaaagggccttggctcctgtgcctgacggttcccaaagtgtcct 385
Query: 186 gtgcactctgcctgatgaaaaattctctgtggtatgcttggctccattgttctcctctga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtgcactctgcctgatgaaaaattctctgtggtatgcttggctccattgttctcctctga 445
Query: 246 gagaagactagatagaaattttctttgccatatctgcctttcttatattttcaatcattt 305
||||||||| |||||||||||||||||||||
Sbjct: 446 gagaagact------------------------------ttcttatattttcaatcattt 475
Query: 306 cataggacactcttccctcacacagagcattgcttctagacaatggtcttctatttacaa 365
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cacaggacactcttccctcacacagagcattgcttctagacaatggtcttctatttacaa 535
Query: 366 agaaaaaatgttttctctacatttctattcatac--------------gctttctatcaa 411
||||||||| |||| ||||||||||||||||| | ||||||||||||
Sbjct: 536 agaaaaaatattttatctacatttctattcatgcaatttctatcaagagctttctatcaa 595
Query: 412 gagctttctatcaagctcttggattaactcaagt 445
||||||||||||||||||| ||||||||||||||
Sbjct: 596 gagctttctatcaagctctgggattaactcaagt 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_k02.g1 MSMg01no426_k02.g1 CHROMAT_FILE:
MSMg01no426_k02.g1 PHD_FILE: MSMg01no426_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:14 2005
(433 letters)
>mm_chr3_67942941_67943773
Length = 833
Score = 783 bits (405), Expect = 0.0
Identities = 426/433 (98%)
Strand = Plus / Minus
Query: 1 atttgccatgttctttttgggaagcattgtgagaagtataatttaaaactgcgctctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atttgccatgttctttttgggaagcattgtgagaagtataatttaaaactgcgctctctt 537
Query: 61 ttgcatggcctctgcaagaaataaaagggggctcacaatacgtgtttctcctataatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttgcatggcctctgcaagaaataaaagggggctcacaatacgtgtttctcctataatgag 477
Query: 121 ggctctgttcggtctgtctgcctctgtgtgaattgctccttcagacagaaagttaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggctctgttcggtctgtctgcctctgtgtgaattgctccttcagacagaaagttaaaact 417
Query: 181 gtaatgagtcaaaattcttgcagggcctaaactgctcctatggagtaaatgagacatctt 240
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtaatgagtcaaaattctcacagggcctaaactgctcctatggagtaaatgagacatctt 357
Query: 241 ttcatgcttaactctttcagaatcccagacactctggaaaaagttgctaatggttcaaga 300
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttcatgcttaactctttcagacccccagacactctggaaaaagttgctaatggttcaaga 297
Query: 301 aacccatttttgctgtcaaagctgtctcattagctaatggtgagcgatctctccagacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aacccatttttgctgtcaaagctgtctcattagctaatggtgagcgatctctccagacct 237
Query: 361 ttttttccccaaattaaaatacctagtttagattctagcaacagcagcagcagcagcagc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 236 ttttttccccaaattaaaatacctagtttagattctagcaacagcagcagcagcagcaac 177
Query: 421 agcagcaacaaca 433
| || ||||||||
Sbjct: 176 aacaacaacaaca 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
